Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | IVTLMDYYYVHYGYDLIYWLNEIRREPMEYILSGIVLAVVVHVVMSCVEVTILSTLIRRNTCRYNKPRQYFEERYRRFVVMRLVQQLENALQMQKRFTGQGRQNEQEMAMLEDLHSSHQQIHQAVNDFRSSVAVLLWPNRADLQMDAFILYHIDEGQLDELKSQGYSLSQPDNRDIRNEHLKCLLN |
1 | 3c2hB3 | 0.10 | 0.10 | 3.55 | 0.68 | SPARKS-K | | -----------LENILPFLLRLIEIHPDDEVIYSGTGFLSNVVAQHVKDIAIRIFLLHTIISKYPRLDEAPKRNRVCEIICNCLRTLNNFLMMWPTPNGTKTAGPNEKQQVCKFIDILKKLMSCLSELRSTILRSFILLRTPF-VPKDGVLNVIDEHICAAYSWVFRQPNNTTQSTKQQLVERTIS |
2 | 5z8tA2 | 0.09 | 0.07 | 2.65 | 0.90 | FFAS-3D | | ---------------------------------GWLLHIPACYLGIALAARDFALEYAATYRPNTLPHPIAEVPHVEQKLGEMELKLLAARTLLYDLARDAASPEERVKLQPQFGAVKTLATNAANQVVDLAMRVVGGRSLSRALPLERYY---RDVRAGLHNPP-------MDDVVYRNLAKAA- |
3 | 6ftj1 | 0.14 | 0.09 | 2.95 | 0.25 | HHpred | | ----------------------------EPL----LVVAAFYILFF--TVII-YVRLTKPAAEARMKVACITEQVLTLVNKRIYRHFDETINRYKQSRD-----------VSTLNSGKKSLETEHKALTSEIASLQSRLKTEG-SDVSEMQK-LDAQVKELVLK---------------------- |
4 | 3u44A | 0.11 | 0.11 | 3.85 | 0.70 | MUSTER | | LDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELP--FYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQDDFSELYKRVPAV--------DPALLDEATDLRNGAKKLLEKLKTDYFTRSPLKSLAEMKPVIETLVQ |
5 | 6d0yC | 0.11 | 0.10 | 3.66 | 0.69 | CNFpred | | LVGLLNARNYNFGGEFVAMIRQLKESEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQ---EDVPQVRRDWYVYAFLSSLPWVGKELYEKK----------------DAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPLAFDSILCEALQ |
6 | 2pffB | 0.12 | 0.12 | 4.14 | 0.82 | HHsearch-2 | | IRTTLDEKVFTQGLNILEWLENPSNTPDKYLLSIPI---SCPLIGVIQLAHYVTALFTPLKGAVTAVAIAETDSWESFFVSVRITVLFFIGVR---CYEA----YPNTSLPPSILEDSLENVNKTNSHLPAGKSLVNGAKNLVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSEASDLINKDLVK |
7 | 5cwmA | 0.11 | 0.11 | 3.90 | 0.80 | Neff-PPAS | | LEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQE |
8 | 5c2cA3 | 0.14 | 0.05 | 1.66 | 0.43 | HHsearch | | ----------------------------------------------------GGGSYHI-----DSPAA-------------GAVSLRQAYECW-----------KAGADPIEWAKEHKEFARAFESFPKDADKLF-PGWREKLGVHK-------------------------------------- |
9 | 6b85J | 0.13 | 0.11 | 3.75 | 0.71 | SP3 | | -------------------------SKDTEDSRKIWRTIMLLLVFAILLSAIIWYQITTNPDTSQIATLLSMQLLLIALMLVVIALLLSRQTEQVAESIRRDVSALAYVMLGLLLSLLNRLSLAAEAYKKAIELD--PNDALAWLLLGSVLEKLDEAAEAYKKA--IELKPNDASAWKELGKVLEK |
10 | 5cwmA | 0.10 | 0.10 | 3.61 | 0.78 | PROSPECTOR2 | | AEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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