Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VRLRLQFDYPPPATPHCTVFWLLVDLNRCRVVTDLISLICQRFGFSSGAILGLYLEGGLLPPAESAHLVRDNHRLRVKLEERGVAENSIVVSNGDSTHLSARKAKKWRFKLEEDKEIEPSYKYSKKHWKRQE |
1 | 2zeqA | 0.14 | 0.08 | 2.61 | 0.87 | SPARKS-K | | MIVFVRFNSSYG---------FPVEVDSDTSILQLKEVVAKRQGV-PADQLRVIFAGKELPNHLTVCDLEQQSIVHIVQRPRRR------------------------------------------------ |
2 | 1x1mA | 0.11 | 0.08 | 2.70 | 0.64 | FFAS-3D | | WHLAVKLADQPLAPKSILQLPETEYSLGGYSISFLKQLIAGKLQVPDPELIDLIYCGRKLKDDQTLDFIQPGSTVHVLRKSWSGPSS--------------------------------------------- |
3 | 1v5oA | 0.11 | 0.08 | 2.71 | 0.53 | HHpred | | MLITVYCVRRDL---TEVTFSLQVNPD--FELSNFRVLCELESGVP-AEEAQIVYMEQLLTDHCSLGGLKDGDMVVLLQKDNVGLRTPGRTPSG-------------------------------------- |
4 | 5n8oA | 0.13 | 0.12 | 4.23 | 0.75 | MUSTER | | ITGRRQLLEGMAFTPGST---VIVDQGEKLSLKETLTLLDGAA--RHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRP-ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQ |
5 | 2fazA | 0.14 | 0.08 | 2.61 | 0.67 | CNFpred | | MWIQVRTMD------GRQTHTVDSLS-RLTKVEELRRKIQELFHVE-PGLQRLFYRGKQMEDGHTLFEVRLNDTIQLLVRQS-------------------------------------------------- |
6 | 1x1mA | 0.12 | 0.08 | 2.68 | 0.52 | HHsearch-2 | | WHLAVKLADQPL----APKSILQLPETGGYSISFLKQLIAGKLQVPDPELIDLIYCGRKLKDDQTLDGIQPGSTVHVLRKSWSGPSSG-------------------------------------------- |
7 | 2jz3B | 0.11 | 0.10 | 3.54 | 0.90 | Neff-PPAS | | VFLMIRRHKTT----------IFTDAKESSTVFELKRIVEGILKRPPDE-QRLYKDDQLLDDGKT---LGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ-- |
8 | 6mdhA2 | 0.14 | 0.08 | 2.58 | 0.57 | HHsearch | | LSILVRNDR-------GNNRAYEVQLT--QKVARLKEQVAERESTN-VDQFWLSFQGQPLDDEKQLGDLTPHCTVQMNLR---------------------------------------------------- |
9 | 4hwiB | 0.09 | 0.08 | 3.17 | 0.89 | SP3 | | IRVRIKY--------GAVYHEINISPQA--SFGELKKMLTGPTGIHHQD-QKLMYKDKERDSKAFLDVVKDKSKMVLIEDPLSQEKRFLEMRKIAKTEKASKAISDISLEVDRLGGTKKGGKIAEKDLVTIE |
10 | 1uelA | 0.13 | 0.09 | 3.14 | 0.53 | PROSPECTOR2 | | MQVTLKTLQQQ---------TFKIDIDPEETVKALKEKIESEKGKDAVAGQKLIYAGKILNDDTALKEIDEKNFVVVMVTKPK--------------------------------AVSTPAPATLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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