Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | ALMNSVKAQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRKQRGGASRRRFGKPKARERQRVKDADGVLCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTTPIAELLIVAPEKLAEVGEFDPSKERLLEYSRRCFLALDDETLKKVQALKKSKLLLPITY |
1 | 4cgkA1 | 0.12 | 0.11 | 3.89 | 0.97 | SPARKS-K | | AQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAV-----TSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKAKKAISEKQVANNDAINTVIANQQKADDAQALTTKQAELKAAELSLAAEKAT--AEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANT----- |
2 | 5voxM | 0.14 | 0.12 | 4.20 | 0.82 | FFAS-3D | | --LGLMKTKLKLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVSYATGENIGY----QVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQ------VQRAKEIYSRAVETLVELASLQTAFIILDEVKVTNRRVNAIEHVII--PRTENTI----AYINSELDELDREEFYRLKKVQEKKQNETA--KL----- |
3 | 5mpbM | 0.08 | 0.08 | 3.01 | 0.32 | HHpred | | -RAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEKTSSRQTVFLPVGLVDPDKLKPNDLVGVNKDSYLILD-TLPSEF--DSRVKAMEV-DEKPTETYSDVGGLDKQIEELVEAIVLPMK---RADKFKDMGIRAPTLLARACAAQTNLAAPQLVQYIGEGAKLVRDAFALAKEKAPTIDEEVQRTMLELLN--------- |
4 | 4cgkA | 0.09 | 0.09 | 3.45 | 0.92 | MUSTER | | EQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAA--ELSLAAEKATAEGEKASLLQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRP |
5 | 5j1iA | 0.13 | 0.09 | 3.16 | 0.67 | CNFpred | | GKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEA----------------------------------------------------QQPTFDALRDELRGAQEV--GERLQQRHGERDVEV---ERWRERVAQLLERWQAVLAQTVRQRELEQLGRQLRYYSADPLGAWLQDARRR-------- |
6 | 2oqqA | 0.25 | 0.05 | 1.41 | 0.50 | HHsearch-2 | | AYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 5nnvA | 0.08 | 0.07 | 2.93 | 1.60 | Neff-PPAS | | AKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQTVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTS---ESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL----- |
8 | 6f1tX2 | 0.11 | 0.07 | 2.46 | 0.94 | HHsearch | | IRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG-HDK-------------------------------------------------------------------DLQLHQSQLELQEVRLSRQLQGGGGGGGGGGGGGGGGGGGGG-----G-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
9 | 5cwqA | 0.14 | 0.13 | 4.50 | 0.75 | SP3 | | ---EELERESEEAERRLQEARKRSEEARERGD--LKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRV-LEEARKVSEEAREQGDDEVLAL---ALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDE----VLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVE-EEARKVKESAEEQGDSEVKRL |
10 | 5nnvA | 0.11 | 0.10 | 3.45 | 0.80 | PROSPECTOR2 | | AKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQ----------------------EQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTE------TELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTIELIALRRDQRIKLTTLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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