>PF15771 (574 residues) GNTKSSNWNSNQTDHSSLSDSQFLFGSQFCPESSETLSAPLDFGAHLRRPKQSQQNSLES EPSVFTKYQTKPQLFGGDKKDGGLFPLPLSVGKSKGLLEQFEEKKKRAKDRCDSEALYNF ISHTRESIYRLQTSVEKSEEHLSSRSQSILDSLETVAKTLQETAQAQSDLVLETAQDKGN MEQAILEMQKRFEARQAEFSEMKSNLKHLEVLVAQQNKDFQQLCEQLGQLNVPSILAELK RLISVPQVPRHVKDSTSQTSPPLAQSLNFTRQDKYASEEPILWQAQALPAARILNRGSLQ PGEFGVWGERAKNDTLQKEAALLAVGTGKRNRPVKDKAVQTNCKNLAITKTGSENHSLDI QGHKVPGDRDLVSPGASQLISLDLNNFATSIKNTCQELQAKGLFSCDPCEQQLVTEQKGR AVERVAKGKKQQPRKVQRGRLLARKQEQTPSKTCAFSSKYPQPPVSGPQRLPVEQQEPLD QPLHLRRPRSPTKPVCPALGGTVMPSKTVRAAQGNLLQFSRHSSQDNSLLSNSSQGDHRM SWFSDLNLGSSEPPLCKEPGKNTLYDLGFDSSDD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GNTKSSNWNSNQTDHSSLSDSQFLFGSQFCPESSETLSAPLDFGAHLRRPKQSQQNSLESEPSVFTKYQTKPQLFGGDKKDGGLFPLPLSVGKSKGLLEQFEEKKKRAKDRCDSEALYNFISHTRESIYRLQTSVEKSEEHLSSRSQSILDSLETVAKTLQETAQAQSDLVLETAQDKGNMEQAILEMQKRFEARQAEFSEMKSNLKHLEVLVAQQNKDFQQLCEQLGQLNVPSILAELKRLISVPQVPRHVKDSTSQTSPPLAQSLNFTRQDKYASEEPILWQAQALPAARILNRGSLQPGEFGVWGERAKNDTLQKEAALLAVGTGKRNRPVKDKAVQTNCKNLAITKTGSENHSLDIQGHKVPGDRDLVSPGASQLISLDLNNFATSIKNTCQELQAKGLFSCDPCEQQLVTEQKGRAVERVAKGKKQQPRKVQRGRLLARKQEQTPSKTCAFSSKYPQPPVSGPQRLPVEQQEPLDQPLHLRRPRSPTKPVCPALGGTVMPSKTVRAAQGNLLQFSRHSSQDNSLLSNSSQGDHRMSWFSDLNLGSSEPPLCKEPGKNTLYDLGFDSSDD | |||||||||||||||||||
1 | 5yfpE | 0.08 | 0.07 | 2.95 | 1.03 | SPARKS-K | ---------SLYELDPKWKKLL----------KTDNFLGGLT-------VNEFVQELSKDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDPKPYIRTFESTLKELKNLNELNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVSPLGDKLKKQNYIQSVELIRRYNDLMKNLLIIPKTINTKLVIEKYSEMMENELLENFNS---AYRENNFTKLNEIAVNVIQS--FINQHDYFIFIKNVKFKEQLIDFENHSVIIETLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRQKIEPRFEVLLRNSLSIS---NLAYVRILHGLFTLFGKFTKSYFQLLEIDDSNQIEQCFLYDRSKYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVDKYKEKLSTNSTARVMELIPNKA-HLYILEILKIMFLGIVDSYMEIALEVAYWKICK-VDINKTAGVVNLNFLKFFLPLLNNSPEIKIIEMTNSQIQKMEILINIILQETITVISTSAILCKQKKKDFVP---KSQELLDQDTLPAIEIVNNLIFEQSSKFLKG | |||||||||||||
2 | 5n8oA | 0.12 | 0.12 | 4.21 | 1.18 | MUSTER | GEWKSSDKVGKTGFIENVYANQIAFGR-------EKLKEQVALGYETEVVGKHGM-PVEA----FVDPEIRMAEWMQTLKETGF--------DIRAYRDAADQRTEIRTQADVQQAVTQAIAGLSERKVQFTDVLARTVGILPPENGVIERARAGIDEAISQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQVSVLAQDRPSLAIVSGGAAGQRERVAELVMMAREQGREQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKHNVQVLITDSGQRTGTGSAKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQDRYVIDRVTAQSHSLTLRDAQGETQVISSLDSSWSLFRPEKMPDGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPASLPVSDSPFTALKTPGHSVSDSATVFASVTQMAMNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGE | |||||||||||||
3 | 2pffB | 0.18 | 0.15 | 4.99 | 1.05 | HHsearch-2 | YSTRPLTLSSLEHVLLVPTASFFI-ASQLQEQFNKILPEPTEGFA------------ADDEPTTPAELVGKFL------GYVSSLVEPSKVGQFDQVLNCLTEFENCYLEGNDIHALAATLVKTKELIKNYITARIMAKRPFDKKSNS-ALFRAVGEGNAQLVAQGNTDDYFEELRDLYQTYHVLSELITTLDANILEWLENPSNTPDKDYLLS-----IPISCPLIGVIQLAHYVVTAKLLGFTPGERSYLKGATGHSQGLVT-AVAIAETDSWESVRKAITVLFFVRCYEAYPNTSLPPSILEDSL------ENN-E-GVPSPMLSISQEQVQDYVNKTNS---HLP------AGKQVEISLVNGAKNLVVSGPPQSL-YGLN-L-TLRKAKAPSGLDQS---RIPFS-----ERKLKFSNRFLP--VASPFHSHLLVPASDLINKDLKNNVSFNAKDIQIPVYDTFDGS---------DLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGA----------------SGLGVLTHRNKD-----GTGVRVIGTLDINPDDD | |||||||||||||
4 | 5mqfM | 0.08 | 0.08 | 3.08 | 1.77 | Neff-PPAS | ----LRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALR----ALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKLNVDAIIRGGLTRFTDQLGKLWCSLADYHFEKARDVYEEAIRTV-----------MTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDEKATKVNFKQVDDLASVWCQCGELELRHE----NYDEALRLLRKATALPARRAEYFDGSEPVQNRVYDLEESLGTFQDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARRAVEPAQQYDMFNIYIKRAAE | |||||||||||||
5 | 2nbiA | 0.11 | 0.09 | 3.24 | 1.42 | PROSPECTOR2 | QPSDLNPSSQPSECADVLEDECFLPYSDSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTS-----------------------------------------------------------------------------------------------------------------DPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTM---MPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSESSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPVCSPTMMPSPTE | |||||||||||||
6 | 5yfpB | 0.07 | 0.07 | 2.97 | 1.01 | SPARKS-K | MSKELQHLPNDSMRLNYLVNSKFAFLRDMHKQDSNDLNNSLDRDSDIQDQSIHLKQLVGKNDQIYKEFDEKTNEQCDSPKENQINVESLNKKVDEVIRTTTFKLKPLMDNYQKILNYQATKKFIEKSLKRCNEFIIEYSKGLTLRRRFNQSVIKRIWTQIENLLVTYKDLIWNSLINIDQPQETILSLFSKLLNLENFLRWMSIKMNGFQNELNELSGHMISKIIHSQRLCVELSYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNTISGTSYLNLNCTIIEMWLLILKYINDLWKICDQIEFWEHIEKFLDGTYQNSIINEKRKENILIGDNIIESYQKSLILKEEQINEVRLNLISFITRSNKDSGLDYGFIPPNCNGLSCLRYLPKIVEPILKFSTELAQLNITICRNTLSTIINRCVGAISSTISNFYQLENWQVYETVTFSSKSQD-----SSKNLTFEYGVTQFPEIVTSFQTRDLLFAYEKLPIINGISVVSYKQLLTGIEIQQIISMEAVLEAILKNAAKDKDNPRNSHTLTNLQYFREDDAFEWNLASKNLELFSLLSKMESSI | |||||||||||||
7 | 2pffB | 0.12 | 0.11 | 3.93 | 1.10 | MUSTER | YSTRPLTLSHGSLEHVLLVTASFFIASQLQEQFNKIL------------PEPTEGFAADDEPT------TPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEG-------------NDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLAIFGGQGNTDDYFEELRDLYQTYHVLGDLIKFSAETLSELIR--TTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV---------FFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSI--SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTRKAKAPSGLDQSRIPFSERKLKFSNR-FLPVASPFHSHLLVPASDLINKDLVKNNVSFNA-KDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPD | |||||||||||||
8 | 2pffB | 0.17 | 0.14 | 4.48 | 1.05 | HHsearch-2 | -----------MDAYST----RPLTLSHGSLEHV--LLVPTAS--FFIASQLQEQFN---------KILPE-------PTEGAADDEPT---TPAELV-------GKFLGYVSSLVEPSK---VGQFDQVLNLCLTEFENCYLEGN-DIHA---LAAKLLQE----NDTTLVKTKELIKNYITARIMAKRPFDKNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDQTLVGDLIETLSELIRTTLDA----------EKVFTQGLNILEDKDYPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGQGLVTAVAITDSWESFFVSVRKAIVLFFIGVR------CYEAYPNTSLPPSILEDS-LENNEGSNLTQQDYVNKTNSHLPA-----------GKQVEISLVNGAKNLVVSG--------PPQSLYGLNLTLRK-----AKAPSGLDQSRIPFSERKLKFSNR------FLPVASPFHSHLLVDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSI-SERIVDCIIRLPVKW-ETTTQFKA----THILDFGPDIN | |||||||||||||
9 | 2cseB | 0.11 | 0.11 | 3.99 | 1.57 | Neff-PPAS | DETSVTSPGALRRMTSKDIDEPLVVVTEHAIANFTKAEMALEFNREFLDKLRVLSVSPKYSDLLTYVDVSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKE----AAVALAKRNGGIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAP---VFAIPPKPADYNVRTLKIDEATWLRMIPKTMGTLFQIQVTDNTGTNWHFNLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVGLWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEPEQLNKTDPEMLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVT-VKGAVVSEVVPAEPESLNASLPNDAARCMIDRASKIAEAIKIDDDAGPDEYSPQLAISQLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTIITQAAPVLSDKNLAQGVKTSLRTKSLSAGVKTAVSKLSSSESIQNWTQGFLDKV--STHFPAP-- | |||||||||||||
10 | 5mqfM | 0.09 | 0.09 | 3.25 | 1.36 | PROSPECTOR2 | FSVKCRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDRAFVFMHKMPRLWLDYCQFLMD-------------QGRVTHTRRTFDRALRA-LPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSHFEKARDVYEEAIRTV-----------MTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVL----LRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGDNGQLDDKATKVNFKQVDDLASVWCQCGELELRHENY--DEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSRIATPQIFKWPNVSDIWSTYLTKFIARYGGRKLEDGCPPKYAKTLYLLYAQLEEEWGLRATRAVEPAQQYAAEIYGVTHTRGIYQKAIEVLSDEHICDPRTTGAFWQVRHGNEDT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |