Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | WGWGDGPGAPGNLRDPDHVSTAPARRSGPRRARSGPGREEQGGGVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRDRGPCTLARMAMRSALARVVDSTSELVSVEQTLLGPLQQEQSFPIHLKDSVEFRNICSHLALQIEGQQFDRDLNAAHQCLKTIVKKLIQSLANFPSDAHVVACASLRQILQNLPD |
1 | 5cwjA | 0.11 | 0.08 | 2.83 | 0.68 | SPARKS-K | | ----------------------------------------------DSEEEQERIRRILKEARKSGTQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESSEEALRQAIRAVAEIAKEAQ---DSEVLEEAIRVILRIAKESG---SEEALRQAIRAVAEIAKEVLEEAIRVGSEEARRQAERAEEEIRRRAQ |
2 | 3m1iC5 | 0.18 | 0.08 | 2.69 | 0.61 | FFAS-3D | | ------------------------------------------------------------------------------------MSEDTEKRFVVTVIKDLLDLTVK------------------KRGKDNKAVVASDIMYVVG-QYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQK--- |
3 | 1vt4I | 0.14 | 0.10 | 3.52 | 0.42 | HHpred | | -----------------------------------------------------DMPKSSKEEIMSKDASGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQMTRMYNDNQVFAKYNVSRLQPYLKLRQALLELRPASGKTWVALDVCLSYKVQCKMDFLNLKNCNSPETVLEMLQKLLQIDPN |
4 | 1st6A | 0.13 | 0.13 | 4.64 | 0.90 | MUSTER | | KGWLRDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDEARALAKQIATSLQNLQS |
5 | 5vchA | 0.09 | 0.05 | 1.77 | 0.57 | CNFpred | | -----------------------------------------------------------------------------------AVVQLAALKCIVQLSTNLQDEVQYLPLVIDIIDSAKHVVIYKYATLALDGLLEFI-----------AHNDIIKYLDPLMNKLFQMLETQSPKLRAAIVSAIGSCAFAAGS |
6 | 1vt4I3 | 0.12 | 0.06 | 2.20 | 0.47 | HHsearch-2 | | ------------------------------------------------------------------------------------------EYALHRSIVDHYNIPKFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDPKYERLVNAILDFLPKIEENLICS---KYTDLLRIALMEDEAIFEE |
7 | 5cwmA | 0.12 | 0.11 | 4.07 | 0.84 | Neff-PPAS | | --EDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGSGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQE |
8 | 1yvlB1 | 0.24 | 0.10 | 3.24 | 0.45 | HHsearch | | -------------------------------------------------------------------------------------------SQWYE----LQQLDSLEQ--VHQL-YDDSFPM------EIRQYLAQW---LEKQDAANDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQ- |
9 | 1st6A | 0.13 | 0.13 | 4.64 | 0.68 | SP3 | | KGWLRDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGDSPEARALAKQIATSLQNLQS |
10 | 2kr6A | 0.12 | 0.10 | 3.48 | 0.76 | PROSPECTOR2 | | MVWLVNMAEGDPEAQRRVSKNSKYNAESTERESQDTVAENDDGGFS------------------EEWEAQRDSHLGPHRSTPESRAAVQELSSSIL---------------AGEDPEERGVKLGLGD-FIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKAVFYFATDYLVQPFMDQLAF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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