>PF15710 (679 residues) MTKRKKLRTSGGEGIRPPKLPKNPRLGDSGRPPQSSEWGCLCLPEASEGRSGPVPSAEQR TEEPVQAASSSPAEEAQAPAGLHGEPEKEPAPLPLSQNSARRFVPQFAKSRKTVTRPAEL REEDLRSRIPKIRQETPPGPSSQQARSRLQEESLGLASWEAREPGAQTQVDSTHPEHRDQ NLMTPVPESGDSPPSASTNVSPERGMVPLASERASQDHLSEQGTNTPDGESRKGCWVLGY HGQKGLLLSSDAEEKEPDRGSLQEAGVQGGAEADLPEGHREKGDSVLGPSSTQGPEPGSA DQALSDPMQIPSKTSREAEQSCSGPSHSSLGTVVITDRRTDPTEPERRAPEVAKPDEQAN TRAPSSPSGKAPDGGHSGALLSCTLLTGEAGGRREARWEDKPPGNILGGPLGSLALDRRI KEPIVGAGDSSLLASEVGPPVDQTRAPGLDEEGLGGICALPLLLQPEGEKAAELRSQSPK EDLDWFNLSLGAFAPPVHREAVGGPSQETRACHDHPGAPEDPTGWSEPPPGSADQALLGE SPAMEPHFLPDSQIRDALEVPDLAASPEQLFPLGSRLDSRWPGTSLHADGGPLTDFQLRT CVGIKACEAARMEDATDTVRGLVVELSNLNRLIMSTHRDLEAFRRLNYRKARPAGKAPAP YTSKGAGNLPPGERSWRDL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MTKRKKLRTSGGEGIRPPKLPKNPRLGDSGRPPQSSEWGCLCLPEASEGRSGPVPSAEQRTEEPVQAASSSPAEEAQAPAGLHGEPEKEPAPLPLSQNSARRFVPQFAKSRKTVTRPAELREEDLRSRIPKIRQETPPGPSSQQARSRLQEESLGLASWEAREPGAQTQVDSTHPEHRDQNLMTPVPESGDSPPSASTNVSPERGMVPLASERASQDHLSEQGTNTPDGESRKGCWVLGYHGQKGLLLSSDAEEKEPDRGSLQEAGVQGGAEADLPEGHREKGDSVLGPSSTQGPEPGSADQALSDPMQIPSKTSREAEQSCSGPSHSSLGTVVITDRRTDPTEPERRAPEVAKPDEQANTRAPSSPSGKAPDGGHSGALLSCTLLTGEAGGRREARWEDKPPGNILGGPLGSLALDRRIKEPIVGAGDSSLLASEVGPPVDQTRAPGLDEEGLGGICALPLLLQPEGEKAAELRSQSPKEDLDWFNLSLGAFAPPVHREAVGGPSQETRACHDHPGAPEDPTGWSEPPPGSADQALLGESPAMEPHFLPDSQIRDALEVPDLAASPEQLFPLGSRLDSRWPGTSLHADGGPLTDFQLRTCVGIKACEAARMEDATDTVRGLVVELSNLNRLIMSTHRDLEAFRRLNYRKARPAGKAPAPYTSKGAGNLPPGERSWRDL | |||||||||||||||||||
1 | 5jcss | 0.07 | 0.07 | 2.76 | 2.10 | SPARKS-K | PSRGETVKAANGFQLSTVRINEDHQKDSSNKIYNLNMIGMRIWNVIE---LEEPSEEDLTHAQKFPILTNLIPSIYMNTKFISLNKGAHTRVVSVRDERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCF-AGAIGEFKALEPIIQAIGESLDILFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQQQLAKMLADLLGGYKPKTVAVPIQENFETATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIEGEWLLLDEVNLATADTLESISDL-LTEPDSRSILLSEKGDAEPIKAHPDRIFACMNPATDVGKRDEIYVHSPERDITDLLSIIDKYIGKYSVSDEWVGNDIAELYLEKKLSDNNTIVDGSNQKPHFSIRTLTRTL-----LYVTDIIHIYGLRRSLYGFCMSFLTLLDQKSEAILKPVIEKFTLGRLKNVKSIMSYIITPFVEKNKYLADIHEHTDLQEYLGTYVTDDLDELNL-APTDELFPETQEVVHPHPDPPGIYGGRKILSRAFRNRFLELHFDDIPQDELEIILR------ERCQIAPSYAKKIVEVYRQLSIERSASRL-----FEQKNSFATLRDLFRWALR | |||||||||||||
2 | 1zlgA | 0.10 | 0.09 | 3.31 | 1.72 | MUSTER | AAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGLKPRKELRFTELQSGQSSKFNISIEPVIRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSDLPEEPDIPVHHWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRPEACAHNRTTGSEASSGMTHENYIILQDLSFPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITKMAKANLYQPMTAEVTTESRQNSLPNSIISQSQILPSDHYVLRPSTL-QVL-GEGPATIKTF-----------RTPELPPSSAHRSHLKHRHPHHYKPSPERYGKPIPNPLLGLDSTRTGHHHHHH------------------------------------------------------------------- | |||||||||||||
3 | 2cseB | 0.10 | 0.09 | 3.34 | 5.09 | Neff-PPAS | --------TGDGNVFKPSAETSSTAVPSLSLSPGMLNPGGVPWIAIGDETSVTSP----------GALRRMTSKDIDEPLVVVTEHAIAN--FTKAEMALEFNREFLDKLRVLSVSPKYSDLLTYVDCYVGVSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSSVVKLLDDQLPDDSLIRRYPKEAAVALAKRNG-----------GIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADY---------------NVRTLKIDEATWLRMIPKTMGTLFQIQVTDNTGTNWHFNLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSW-----DPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQ------SIIATTSLAYNYEPEQLNKTDPEMNYYLLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVTVKGAVVSEVVPAELIGSYTPESLNASLPNDAARCMIDRASKIAEAIKIDDDAGPDEYSPNSVPIQGQLAISQLETGYGVRIFNSKIASRAMQAGDPSTIITQAAPVLSDKNNWIALAQGVKTSLRTKSLSAGVKTAVSKLSSSESIQGFLDKVSTHFPAP | |||||||||||||
4 | 2nbiA | 0.11 | 0.08 | 2.84 | 2.71 | PROSPECTOR2 | ---------------QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNI-----NCPRCCATECRPDNPMFTPSPD----------------------------GSPPICSPTMLPTN------------------------------QPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAV--NRPDCDVLPTPQNINCPACCAFECRPDNPMFT------PSPDGSPPICSPTMMPSPEPSSQ-----------------------PSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSP------------------DNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLP---------FDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRP-------------------------------------------------DNPMFSPSPDGSPPVCSPTMMPSPLPSPTE | |||||||||||||
5 | 6em5m | 0.11 | 0.10 | 3.44 | 1.87 | SPARKS-K | ----YSKYADGSDRIIKPEINPVYDSDDSDAETQNTIYDEMPHIGYDINGKRIMRPAKGSALDQLLDSIELPEGWTGLLDKNSGS----SLNLTKEELELISKIQRNEQTDDSINPYEP-LIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLGDSTETNDHVMHLRAPKLPPPTN--EESYNPPEEYLLSPEEKEAWENTEYSERERNFIPQKYSALRKVPGYGESIRERFERSLDLYLAPRVRKNKLNI--DPNSLIPELPSPKDLRPFPIRCHKGKVRTLSIDPSGLWGSDDGTVRVWEILTGREVYRTTLIDDEENPDYHIECIEWNPDANNGILAVAVG-ENIHLIVPPIFGYDIENNGKTKPSQKQLEKDICITISCKKTVKTVQPDSTSVLIHQVSKHLTQSPFKKS----KGIIMDAKFHPFKPSQRYVDLSQQILVKKLLPGA--RWLSKIDIHPRLIASSFDKRVLWHDLDLASTPYKTLRYH-----------EKAVRSVNFHKKLPLDDGTVYDDMMKNPM------IVPLKKLTGHKVINSLGVLDAIWHPREAWLFSAGA----DNTARLWTT--------------------------------------------------------- | |||||||||||||
6 | 3chnS | 0.10 | 0.08 | 2.95 | 1.61 | MUSTER | -----KSPIFGPEEVNSVE--NSVSITYYPPTSVNRHTRKYCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDGLGINSRGLSFDVSLEVSQGPGLL---------------NDTKVYTVDLGRTVTPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVNQLRLSDAGQ---QAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAK-------RQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRGAHSDGQL-QEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYN-------RKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVI---NQLTSRDAGF-LTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKNNTGCQALPSQDEGPSKAFVNCDENSRLVS-NLVTRADEGWYGETAAVYVAVEE---------RKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAI-QDPR-------------------------------------------------------------------------------- | |||||||||||||
7 | 5lqwQ | 0.07 | 0.07 | 2.77 | 4.68 | Neff-PPAS | ----YQLGDLTKPYVHKILVVAAPLLIDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQLLPFINAACHSRKSWKAQQIGILLGIGVLNHLTGLMSCIKDCLMDHVPVRIVAENSYPYGIEVFNVVLEPLWKGIRSHVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRREFDSDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRVALDRPLNKVVTYTTVTLAKKLGSYTIDKLLTPLRDEAEPHAVTRTVNLLGTADLDERLETRLIDALLIAFQEQTNSDSI-IFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITSVMDLDPINQILPTLT------PILRNKHRKVEVNTIKFVGLIGKLPKEWMRICFELLELLKSTNKEIRRSANATFGFIAPHDVLVALLNNRVCTAVAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNSFMFEYIGNMSKDYIYFITPLLEDALTDLVHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAF-----WRVYNNMYVMYQDAMVP | |||||||||||||
8 | 3j3iA | 0.08 | 0.08 | 3.19 | 2.53 | PROSPECTOR2 | MAAPVLYGGAGGTATGPGDMRRSLMHEKKQVFREAQALRVAKEARGKMSVWDPSTREGARGYREKVVRFGRQIASLQIYGDIDRDPDKCEVEVKLYAGPLQKLMSRVGAAREGIPNRNDVQDQVQKFPDNRMDSMAERKEVDFHVGNHIHVTYAIAPVCDSYDLPGRCYVFNSKPTSEAREYPPPQFASHVSVPADAEDVGRQIQPGSAVTLNPGLENRYFSRIGLPTVVSLYDLMVPAFIAQNSALEGARLSGDQSRTGFDPSHGIRQYLNSNSRLVTQMASKLTGIGLFDATPQMRIFSEMDTADYATIFEGLWLVQDASVCTDNGPISFLVNGEKLLSADREHHKMPRWVAAKRDSALRLTPRSRTAHRVDMVRECDFNPTMNLKAAGPKARLRGSGVKSRRRVSEVPLAHVFRSPPRRESTTTTDLTREGPQLTRRVPIIDEPPAYESGRSSSPVTSSISEGTSQHEEEMGLFDAEELPMQQTVIATEARRRLGRGTLERIQEAALEGQVAQGEVTAEKNRRIEAMLSARDPQFTGREQIDGGLGVREREEWLELVDKTVGVKGLKEVRSIDGIRRHLEEYGEREGFAVVRTLLSGNSKHVRRINQLIRESNPSANNIPSDIQVAGKKRMCPQLSSEEFSTCSEARNAPSSLGVRPFAQEDAATCGGGGGKDSLE | |||||||||||||
9 | 5yfpE | 0.06 | 0.06 | 2.48 | 1.77 | SPARKS-K | -----------------------------SLYELDPKWKKLLKTDNLGGLTVNEFVQELSKDHRNDVLIDANTKNLPTN---EKDQDAIREAIWKQLDPK-PYIRTFESTNEETLNKRQYFSEQVATQEVIHSENVIKDLHTTLLTFDKLDDRLTNVTQVVSPLGDKLETAIKKKQNYIQSYNDFYSMGKSDIVEQLRLSKNWKLNLKSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMSAYRENNFTKNNFNGG---VNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMINDVETVIKNESKIVKRVFEEKATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAGKFTKSLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFGIEKILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSLNKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAGVVPLLNNSPEIKAQIIEMTNSQKMELQETITTKFSAILCKKDF-VPKSQELLDQDTLPAILNLIFEQS-SKFLKGK---------NLQTFLTLIGEELYGLLHYSHFQVNSIGVVVTKDIGYQTAIEDWGVASLIDKLFTVQPELLESLTKEGHLADIG | |||||||||||||
10 | 2nbiA | 0.13 | 0.09 | 3.18 | 1.61 | MUSTER | ---------------------------------------------------------QPSDLNPSSQPSECADVLEECPIDECFLPYSDAS-RPPSCLSFGR--PDCDVLPT------------PQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCG-EVIEECPLDTCFLPTSDPARPPDCTAVGRPDC-DVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLP----TPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDC--TDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTP-SPDGSPPICSPTMMPSPEPSSQPSDCGEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNSCCPFECSPDNPMFTPSPDGSP-PNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDD-SSRPPDCTDPSVNRPDCDKLSTAID---------FTCPTCCPTQCR--PDN--------PMFSPSPDGSPPVCSPTMMPSPLPSPTE------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |