Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | AKEAAPPALKGDTMLKNIFVELKNKYETAIGLLKKEKITIDPEDPAAVSHYAQVMKTIREKASLSSESQHIQESIETQTADIPDARTYLLTLKEIRIKSGLADDLGAEALMIEALEKIEKDLKKPLLRNDKKGMDLLLAEFDKINKKLGIQKENLPKYEEKLELSIAKAQLEELKKDALEAIETQSK |
1 | 5cwjA | 0.14 | 0.11 | 3.85 | 0.90 | SPARKS-K | | -----------------DSEEEQERIRRILKEARKSG------TEESLRQAIEDVAQLAKKSQDSELEEAIRVILRIAKESGEALRQAIRAVAEIAKEA---QDSEVLEEAIRVILRIAKESG------SEEALRQAIRAVAEIAKEAQD--PRVLEEAIRVIRQIAEESSEEARRQAERAEEEIRR |
2 | 5xa5A | 0.16 | 0.14 | 4.83 | 1.09 | FFAS-3D | | -TFPLKPGQTTEGLVATLDAAVANFLQTGSFAISKCPIA--NSDPRAIDLLHEALGAVQDT------GQVMIQTGRDFVRDTNSGRNLLTAVAKFLI---LADSIDVKVI-VDKVDEVRETAHQMIEADTKIKVDDLYNLLISQIEELDIRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFVR |
3 | 4tqlA | 0.18 | 0.17 | 5.56 | 0.79 | MUSTER | | YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKI--------QEVKQEVEKAIEEMKKLYD--EAKKKIEQMIQQIKQGGDKMEELLKRAKEEMKKVK-DKMEKLLEKLKQIMQEAKQKMEK-LLKQLKEEMKKMKEKMEKLLKEMKQREEVKKKLLEKIKIDDLKKIAEDLIKKAEENIKEAKK |
4 | 5cwdA | 0.15 | 0.12 | 4.14 | 0.67 | CNFpred | | -------------------EDARSTCEKAARKAAES------NDEEVAKQAAKDCLEVAKQAGM-PTKEAARSFCEAAA-DEEVAKIAAKACLEVAKQAGM-PTKEAARSFCEAAARAAAES------NDEEVAKIAAKACLEVAKQAGMPTKEAARSFCEAAKRAAKESVEKIAKKACKEVAKQAG |
5 | 4tqlA1 | 0.19 | 0.11 | 3.64 | 0.37 | HHsearch-2 | | ----------------------------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKA-I---ELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKK |
6 | 5cwjA | 0.12 | 0.10 | 3.43 | 0.86 | Neff-PPAS | | ------------------SEEEQERIRRILKEARKS------GTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESG------SEEALRQAIRAVAEIAKEAQ-DPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRR |
7 | 4abxA | 0.16 | 0.12 | 4.09 | 0.43 | HHsearch | | VQSEVSPDPGEEEGLNTELHTIAQAAAGGVELLSD-------GDLNAAGLIGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVA-----EGSAADP-------EALDRVEAR----------------LSALSKLKNKYGPTLEDVVEFGAQAAEELAGLE-----EDERD-AGS--- |
8 | 5cwhA | 0.14 | 0.12 | 4.02 | 0.61 | SP3 | | -----------------DSEEVNERVKQLAEKAKEA------TDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEAT------DKELVIYIVKILAELAKQST-DSELVNEIVKQLEEVAKEATDKELVEHIEKILEELKK |
9 | 2yfaA | 0.11 | 0.11 | 3.88 | 0.80 | PROSPECTOR2 | | GSHMGDMIANGDDTAAANTLAKLDAFSKQQAYLATT--FKSPENVKLLGELGDTISAYKLSLNMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLNITTSRAEMTVQGADIVKRSDALER |
10 | 2kzzA | 0.11 | 0.10 | 3.68 | 0.45 | FFAS03 | | --------LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKYGMSAFGLARQLNI--PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS-RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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