>PF15691 (415 residues) MGKLPLGVVSPYVKMSSGGCTDPLKFYATSYCTAYGREEFKPRMGSHMGTGYKSNYRPVV SYQASLDALDNPAMGEHVRDNYKTVTSQSYRPLEVPDGRYPLPKNLHQTSSGYGREKPSA GPPTKEVRKVHFDTQEYGPQAITGLEPKDMPLLRQQQGKGSLEWENWRYGPRFMTSEYNS KYLNEPIHQPDLLQKKSIGAKEDTGFTEETNKSPIVFQPPSQALPGDPTLLPGRSVTKSD FLPMTHPRGDEFLPVLARGSERETGFSRVNERTLNTRVTTPNPELNSINHWQFQPPQRMQ QTNIGLLGRETMGKKEPTGFSINNSSYVRSPHDPDRDNRYLTTYNQGYFENIPKGLDREG WTRGGIQPQIPGGYAINQPVTRMEASPNPTESLRRLHPHVGRTLTSVDPFYRDTP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MGKLPLGVVSPYVKMSSGGCTDPLKFYATSYCTAYGREEFKPRMGSHMGTGYKSNYRPVVSYQASLDALDNPAMGEHVRDNYKTVTSQSYRPLEVPDGRYPLPKNLHQTSSGYGREKPSAGPPTKEVRKVHFDTQEYGPQAITGLEPKDMPLLRQQQGKGSLEWENWRYGPRFMTSEYNSKYLNEPIHQPDLLQKKSIGAKEDTGFTEETNKSPIVFQPPSQALPGDPTLLPGRSVTKSDFLPMTHPRGDEFLPVLARGSERETGFSRVNERTLNTRVTTPNPELNSINHWQFQPPQRMQQTNIGLLGRETMGKKEPTGFSINNSSYVRSPHDPDRDNRYLTTYNQGYFENIPKGLDREGWTRGGIQPQIPGGYAINQPVTRMEASPNPTESLRRLHPHVGRTLTSVDPFYRDTP | |||||||||||||||||||
1 | 4btgA | 0.14 | 0.14 | 4.68 | 1.36 | SPARKS-K | VGKVP---PTAILEQLRTLAPSEHELFHTDFVCHLSPLGFILP-----DAAYVYRVGRTATY-PNFYALVDCVRASDLRRMLTALSSVDSKMLQATKAKGALAPALNAATTAFERSRGNFDATPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEELSSTIIPWFIEASEVSPFKLRPINIDHMGQPSHVVVYEDWQFAKEIT--AFTPVKLANNSNQRFLDPIGNTFAVSAFVSQRGTNGAEMTLGFPSVVERDYALDRDPMVAIAGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVGVAAEQGSLVRTELRIPVGYNAIEGGSIRTPEPLEAYNKPAKVLDLAPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLRRLKPTVAHAIIQMWYSWFVED | |||||||||||||
2 | 3chnA | 0.11 | 0.10 | 3.74 | 1.05 | MUSTER | SGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTTRDTSATTAYMG------SSLRPEDT---A-----VYYARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVILVQGFFPQEPLSVT-ESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLPALEDLLLGSEAN-TGLRDASGVTSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELRGFSPKDVLVRLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILR--VAADWKKGFS-GHEALPLAFTQKTIDRLAGKPTHV-----NVSVVMAEVD | |||||||||||||
3 | 3cnfT | 0.07 | 0.06 | 2.46 | 2.87 | Neff-PPAS | ------------------------------------------------------------MWHYTSINNDTRVALDPKPNQIRTITSHTLR--------LLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAISNPQDAFNSVFVALGIDYI-DIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQRIKHSLAVTGTTEHTIA | |||||||||||||
4 | 2nbiA | 0.09 | 0.09 | 3.33 | 2.04 | PROSPECTOR2 | QPSDLNPSSQPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYDSSRPLDCTDPAVNRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEEKSDSARPPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSP-----DGSPPVCSPTMMPSPLPSPTE | |||||||||||||
5 | 4btgA3 | 0.11 | 0.09 | 3.23 | 1.28 | SPARKS-K | NGSARGLTQAFAIGELKNQLQLPLQF-TRTFSASMTSELLWEAYVYRVGR--------------TATYPFDASVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLFIAYQDMVKQRGR---------AEVIFSDEELSSTIIPWFIEAMSEVSPLRPINETTSYIGQT------------SAIDHMGQPSHVVV--YEDWQFAKEI-----TAFTPVKLANNSNQRFLDVEPGISDLAPTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAGIVDESLEARASNDLKRSMFNYYAAVMHYAVAH----NPEVVVSEHQG---------VAAEQGSLYLVWNVRTELRIPVGY--NAIEGGSIRTPEPLAYNKPIQPSLQAKVLDLANHTTSIHIWP--------------- | |||||||||||||
6 | 1kvpA | 0.10 | 0.09 | 3.28 | 0.67 | FFAS-3D | MKDGVNATPLPTVNTTGYIDHALFQGYLNIYNNYFKAPWMPDRTEANPNELNQDDARYGFRCCHLKNIWTAPVTTKFRDVPNLSGTPLIFRDNKGRTIKTGQLGIGPVDAGFLVAQNTAQAANGERAIPSNLWADLSNATSID------IMGLQAAYANLHTDQERDYFMQRY--RDVISSFGG--KTSYDADNRPLVM-----RSNLWASGYDVD--GTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTLVRFPPTATKEIQYLNAKGALTYTDIAGDPV---------------------LYGNLPPREISMKDV--FRSGDSSYRYAPSYVSPAYHLLEGF--PFIQEPPSGDLQERVLIRHHDYDQ--CFQSVQLLQWNSQVKFNVTVYRNL-PTTRDSIMTS-------- | |||||||||||||
7 | 2pffB | 0.20 | 0.11 | 3.55 | 0.45 | HHpred | ---GATGHSQGLVTAVAIAETDWESFFVSVCYEAYPNTSLPP-------SILEDSNNEGV-PSPMLSISNLTQE--QVQ-DYVNKTNS-HLPAGKQVEISLAKNLVVPPQSLYGGLDQSRIPFS--ERKLKFSNRFLP-----VASPFHSHLLVDLINKDLVKNN----------VSFNAKD----IQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVK------W--ETTTQFKALDFGP----GGASGLGVLTHRNKDGTGVRVIVAGTLDI---NPDD------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 2atyA | 0.10 | 0.08 | 3.04 | 1.03 | MUSTER | PPPILNGRISYYTPIAVG---TVIRYSCSGTFRLIGEKSLLCITKDK----------VDGTDKPAPKCEYF-------------NKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFP-----LEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFP---PKPKDVLTITLTPKVTCVVVDISKDDPEVQFVDDVEVHTAQTQPREEQFNSTFRSVSEMHQDWLNGFK----RVNSAAFPAPIEKTISKTKGRPKAPQYTIPPPKEQMAKDKV---MITDFFPEDITVEGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTHEGLHNHHTEKSLSHSPGK------------------------------ | |||||||||||||
9 | 2pffB | 0.16 | 0.13 | 4.43 | 0.81 | HHsearch-2 | --------MDA-------YSTRPLTLSHGSLEHVLLVEQFNKILPEPT---------------EGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRAVGEGNAQLVAIFGGQGNTDDYFEELRDYTYHVFSAETLSELIRTTLD-------------AEKVFTQGLNIL--EWLENPSNTPDKDYLLSPISCPKLGFTPGEYLKGATGHSAIAETDSWESFFVSVRITVLFPNSLPPSGVPSPML-SISNLTQEQVQPASDLINKDLVKNNVSF----NAKDIQIPVYDTFDGLRVLSGISERIVDCII-------------RLPVKWETTTQFKAHILDFGPGGVLTHRNKDGTGVRVIVAGDINPDDDY | |||||||||||||
10 | 3j8dA | 0.09 | 0.08 | 2.96 | 2.79 | Neff-PPAS | --NIVLTQSPASLAVSLG---QRATISCR----------------------ASESVDSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFNNEDPYTFGGGTKLEIKQVQLLQPGAELVKP--------GASKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAYMQLTSEWYFDVWGTGTTVTVSRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRSAKTTAPSVYPLAPVCGGTTGSSVLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGL----------------YTLSSSVTVTSNTWPSQT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |