>PF15672 (314 residues) SHGEENQDKSTTQSIAEVFKTMENKPISLEGKANLNSEKENRTTSDLKASHSPPLNLSNK SHGITDFSSNLSAEHPSGSVKPTSTISTSPPLIHSFVSKLPWNASIADEDPLPFSAHPNA TPALSSEKFTWSLISDTTNTPDNSSITVSILSSEPASTSVTPLIVEPSGWLTTNSDGFAG FTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLL CGKRKTDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPTLNDSAMPKCQENAHD GIPMDDIPPLRTSV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SHGEENQDKSTTQSIAEVFKTMENKPISLEGKANLNSEKENRTTSDLKASHSPPLNLSNKSHGITDFSSNLSAEHPSGSVKPTSTISTSPPLIHSFVSKLPWNASIADEDPLPFSAHPNATPALSSEKFTWSLISDTTNTPDNSSITVSILSSEPASTSVTPLIVEPSGWLTTNSDGFAGFTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLLCGKRKTDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPTLNDSAMPKCQENAHDGIPMDDIPPLRTSV | |||||||||||||||||||
1 | 6f1tg | 0.07 | 0.06 | 2.66 | 1.09 | SPARKS-K | ---LTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIKLSLNRQFFDERWSKHRVWSSQYPELLVASYNNNEDAPHEMKYKKTTPEYVFHCQSAVMSATFAKFRSNKRTPVQRTPLSCVNVVGTQNISISTDGKSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVVNNFVVGSEEGSVYTACRHGSKAGISEMFEHQGPITAAVGAVDFSHL---FVTSSFDWT-----------VKLWSTKNNKPL---YSFEDNAGYVYDVMWSPTHPALFACVDGWNLNNDTEVPTASISVEGNPALNRVRWTHSGREI | |||||||||||||
2 | 2atyA | 0.09 | 0.09 | 3.47 | 1.08 | MUSTER | GSPPPILNGRISYY---STPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHSVTFACKTNFSMNGNKSANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTVVVDISKDDPEVQFSDDVEVHTAQTQPREEQFNSTFRSVSEL--PIMHQDWLNGKEFKCAFPAPIEKTISKTKGRPKAPQLYTIPPPKPEDITVGQPAENYKNTQPIMNTNEKSNWEAG-EGLHNHHTEKSL | |||||||||||||
3 | 5zazA | 0.17 | 0.03 | 0.94 | 1.01 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVDESRESVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSD-----LREYRRFE------------------------------------------------------- | |||||||||||||
4 | 2bsgA | 0.11 | 0.10 | 3.60 | 1.74 | Neff-PPAS | QYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANS--DIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSI--IKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIG----------------NNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQE | |||||||||||||
5 | 2nbiA1 | 0.13 | 0.12 | 4.18 | 1.71 | PROSPECTOR2 | QPSDLNPSSQPSEPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCG--------------------------EVIEECPIDACFLPKSDSARPPDFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR | |||||||||||||
6 | 4btgA3 | 0.11 | 0.11 | 3.75 | 1.07 | SPARKS-K | ---------GFNLKVKDLNGSARGLTQAFELKNQLSVGALQLPLQFTRTFSASMTSELLWEAYVYRVGRTATYPSTPKELDPSARLRNTDQLRSNLALFIAYQDMVKQRGRAEVI---FSDEELSSTIIPWFIESPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKE--ITAFTPVKLANN--SNQRFLDSATLAPIGNTRGTVNSNAEMTLGFDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNRTPEPLEIAYNKPIQPSEVLQAKVLDLANHTTSIHIWP---------- | |||||||||||||
7 | 1maeH | 0.08 | 0.08 | 3.00 | 1.67 | Neff-PPAS | --------------------SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVPVTFLPIADIELPDAPRFDVGPYSWMPNNADLLFFQFAAGQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYTSEQSAWKLHAAAKTGLVGQTSSQI-SLGHDV | |||||||||||||
8 | 2nbiA | 0.13 | 0.13 | 4.53 | 1.56 | PROSPECTOR2 | QPSDLNPSSQPSEPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFPDCTAVGRPDCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQSPTMMPSPLPSPTE | |||||||||||||
9 | 5a9qA | 0.10 | 0.09 | 3.43 | 1.07 | SPARKS-K | DLGQDGQGMSASVSQNAIVSAAGNIARTIDRSV------------FKIVQIAVIENSESLDCQLLAVTHAFSTCPFRARPNTLTLVHVRLPPSTVEKPSKVHRALYSKGILLMAASENDND-------ILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAID--TPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVEIERFFKLHQEDQACATCLILACSTCDREAWATRAFFRYGGEAQMRFTTLPVYSGKHNGICIYFSRIMGDASLVVESSVPCQLLELQELKGLQEFL | |||||||||||||
10 | 3cnfT | 0.08 | 0.08 | 3.22 | 1.62 | Neff-PPAS | ----HYTSINNDTRVALDPKPNQIRTNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSN-PQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHHTFHYRSESDMHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTAANDQLRRLYRRMYNDSRQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGTTEHTI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |