Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MENQLWHDTLGFCNQYQESPQDAEDILFLLLGLIILVNISINMATVMWKGLQNVLDKMVYWINQKNEVQASECFPKDPPDKAQDVHIHCVLDPVQVKLARPTHFSSSSCHYLLNCHSRRHRHRRYHQQKPQNHKRFPKGCPIFHNQPYGYKMSPPRPVPFFDLEDQDPSLEELEDPSFPILKYPRQGKGGVYQRMDVPSIVGLWGRQGGILASLPPPSLYLSPELRRLPKHVKAKSELRLQS |
1 | 4btgA3 | 0.13 | 0.13 | 4.43 | 1.03 | SPARKS-K | | MTSELLWERVGRTATYPFDANAVVSSVLTILGRLWIDQLRSNLALFI--AYQDMVKQRGRALSSTIIPWFIEAMSEVSPRPINETYIGQ-TSAIDHMGQPSHVVVYEDWQFAKEITTPVKLANNSNQRFLDVERGTVNGFPSVVERDYALDRDPMVAIAALRTGIVDESLEHNPEVVVSEHQGVAAEQGSLVWNVRTELRIPV-GYNGSIRTPEPLEAIAYNKPIQ--PSELQAKV-LDLAN |
2 | 6raoI1 | 0.07 | 0.06 | 2.57 | 0.49 | FFAS-3D | | HTDADWKD-------FWMAGCTLEALSDIYQYPQAFLLALLHLLETPRAMLNTVPARHRSYYRDLLGFAPRAPQPDTLQRNSSPYAL-----PSLLDGGQDSAGNSITYQTDDSLLITGQQLEQLAPELYLGFSGTSAQDTLSLYWSVRASSALDVTWWYYQGTKWQAVLAQAIDDSHFSQPLPANTINQLVTPAAISDVRQPLPSVGG-------QPRETEMAMLQ-----RAAPRIAHRQ |
3 | 1f88A | 0.10 | 0.02 | 0.93 | 0.28 | HHpred | | ------------------QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMKQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 1uf2T1 | 0.17 | 0.14 | 4.78 | 0.74 | MUSTER | | MSRQMWLDTLEAISEYSGLTTGDFNALSNMFTQLSVSSAGVS----PRVPLQTMSNMFVSFITSTDRLRKTWFNSDTKPTVSDDF----ITTYIRPRLQVPMSDTVRQLNNLSLQPSAKPK-LYERQNAIMKGLDIPYSEPDFDSDFLTTFLSQLRACGQYESDAMDQLTNSMDPPAIPAGLAFTSPWFRFSERARVDLNIRLIVRHLWVITSL---GRYYRPN------------------ |
5 | 2wniA | 0.17 | 0.04 | 1.36 | 0.47 | CNFpred | | ----------------------ASQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEASPNV-------------RWLLLVAHDT----------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 1g5uA | 0.16 | 0.04 | 1.37 | 0.45 | HHsearch-2 | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------SWQTYVDD--HLMCDID-------GHR------LTAAAIIGHDGSVWAQSS--SFPFKSEVAAVMKDFDEPGSLALGG |
7 | 3cnfT | 0.12 | 0.12 | 4.22 | 0.98 | Neff-PPAS | | -ETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVQLVVNAPANPQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSKEKLDKGALVEADRVVQRLIPLSSSTYVSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYT--YIFTTAYTSMNYISN |
8 | 5w0yA | 0.23 | 0.07 | 2.33 | 0.45 | HHsearch | | GSSQCNAGPVQCCNTLTSASNSQAAGLIQQLGLSGNVPVGINCNPITGIGA----------------GSGSSCNAN--PATNG-LGVQCN--PINVNL------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 6etxG | 0.07 | 0.07 | 2.88 | 0.75 | SP3 | | APDYIQRSLFHRKGINEESCFSFLRFIDIPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLG-----VNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLDWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRV |
10 | 1mv3A | 0.10 | 0.07 | 2.47 | 0.93 | PROSPECTOR2 | | DGSPAATPEIRVNHEPEPAGGA-------------------------------------------------TPGATLPKSPSQ----------------------------LRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFQNPEEQKESDWNQHKKLEKCRP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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