>PF15661 (649 residues) RRTRSLDRSQSPKKVRRCFSMPTTPSRRMLHQAASDGSRCPQSPAQSVEAQDATATAHSL EETREFLPTDQRLPQDTKKEKTQRRGQQGWLKTLMNFLLRTGPEEPKEKASRKAKGKEGL PKPAETPEAPGETAPRKKAHDKKASRKKHSHKKHVAEETKGAQDQKAEGQEIGLPKMAAA PRPEEADLGPAPKGGKGSGLHQSLLIEAGGPAASEVSSQATGHRPEEELRKLDQDKIIKM IVEFLQKVGDQWEEEQLQAPQPEVVVQIPVSVDRKKFQEKKSSFKRAFSHKKHGSEEAKR AGPADVSSLESRPPKRPSFLPLCVGGHQPSTSSSPGSEEPKVQEVLPTDSGGLSHLELST PAGSQGPEEDLQANRALEFREFIQKIIALLQDAEEQGGEFLSSPPQQLRVQEPEVAVENL SPPYRRRTQEKKSSLRKAFSYKRHGPKGSRRAGAAGAASPESRPPKRPSFLPLCVGGHQP STSNSPDLEDVEFQESSPAEEAPVGSSDAPSQTRSHQPEGGPQPDGVFESKELVIQNLVA LLQEVDGQLGEQIRRHPSFKKFFYKVSDSSLRKLAATLHSQKACSTELGRNLTKRPYQLA FGFTNKFASNNSHAVFSLMGLCYSHASYTHFPYREAQQNITNPDSQSPD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RRTRSLDRSQSPKKVRRCFSMPTTPSRRMLHQAASDGSRCPQSPAQSVEAQDATATAHSLEETREFLPTDQRLPQDTKKEKTQRRGQQGWLKTLMNFLLRTGPEEPKEKASRKAKGKEGLPKPAETPEAPGETAPRKKAHDKKASRKKHSHKKHVAEETKGAQDQKAEGQEIGLPKMAAAPRPEEADLGPAPKGGKGSGLHQSLLIEAGGPAASEVSSQATGHRPEEELRKLDQDKIIKMIVEFLQKVGDQWEEEQLQAPQPEVVVQIPVSVDRKKFQEKKSSFKRAFSHKKHGSEEAKRAGPADVSSLESRPPKRPSFLPLCVGGHQPSTSSSPGSEEPKVQEVLPTDSGGLSHLELSTPAGSQGPEEDLQANRALEFREFIQKIIALLQDAEEQGGEFLSSPPQQLRVQEPEVAVENLSPPYRRRTQEKKSSLRKAFSYKRHGPKGSRRAGAAGAASPESRPPKRPSFLPLCVGGHQPSTSNSPDLEDVEFQESSPAEEAPVGSSDAPSQTRSHQPEGGPQPDGVFESKELVIQNLVALLQEVDGQLGEQIRRHPSFKKFFYKVSDSSLRKLAATLHSQKACSTELGRNLTKRPYQLAFGFTNKFASNNSHAVFSLMGLCYSHASYTHFPYREAQQNITNPDSQSPD | |||||||||||||||||||
1 | 5yfpE | 0.09 | 0.09 | 3.30 | 1.39 | SPARKS-K | -SLYELD-PKWKKLLKTDNFLGGLTVNEFVQELSKDHRNDVLIDANTKNLPTNEKDQD--AIREAIW-----KQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVS-PLGDKLETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKS-------VKLMKNLLILSSKLETSSIPKTIKLVIEKYSEMMENELLENFN-----SAYRENNFTKLNEIAINNFNGGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQNLIKNESKIVKRVFEEKATHVIQLFIQAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFGIEKRSLEAILVDMTSKLDKYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCIPNKAHLYILEILKIMFLGIVDSYMEIAAYWKICKVDINKTAGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLSQIQKMEILINIISTKFSAILCKQKKSQELLDQDIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGSHYSHFQYQTAIEDWGVASLIDKF | |||||||||||||
2 | 1zlgA | 0.09 | 0.08 | 3.13 | 1.31 | MUSTER | ---AAGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQN---HKQCSKCLEPCKESGDLRKHQCQSF-----------EPLFPKKSYELTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRKERFTELQSGSKFNISIEPVIRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVT----DLPEEPDIPVHSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKG----------GIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFS-------KMAKANLYQPMTGFQVT-------WAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNSTLYRL-EVQVLTPGGETIKTFRTPELPPSSAHRSHLKHR | |||||||||||||
3 | 5lqwQ | 0.08 | 0.08 | 3.04 | 2.70 | Neff-PPAS | --LYQLGDLTKPYVHKPLLIDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPVVAKALGVNQLLPFINAACHSRKSWK-------ARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDHVPYGIEVFNVVLEPLWKGIRSHVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRREFDSDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRVALDRPLNKV--VTYTTVTLAKKLGSYT------IDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTADLDERLETRLIDALLIAFQEQTNSDSIIF-KGFGAVTVSLDIRMKPFLAPIVSTILNHLKHKTPLVRQHAADAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIYCITSVMDLDPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLPKEWMRICFELLELLKSTNKEIRRSANATFG-----FIAPHDVLVALLNNRVCTAVAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYI--YFITPLLEDALTDLVHRQTASNVITHLNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFM----NYIWAGLFHPAKN | |||||||||||||
4 | 2nbiA | 0.11 | 0.08 | 3.00 | 1.67 | PROSPECTOR2 | QP----SDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFG-RPDCDVLPTPQNINCPRCCATECRPDNPMFTP-------------------SPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIE------------------------QCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQN------INCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDFLPKSDSARPPDCTAVGR---------------PDCNVLPFPNNIGCPSCCPFECS----------------------------PDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTD--------------------------------------------------PSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNP----------MFSPSPDGSPPVCSPTMMPSPLPSPTE | |||||||||||||
5 | 5yfpB | 0.07 | 0.07 | 2.96 | 1.39 | SPARKS-K | GDEQLLRKTINPTAQDSSKKESRAYLNDESLSYIRDPLNGQEMSKELQHLPNDSMRLNYLVNSKQFNVKAKQDSFNDLNNDSDIQDQSIHLKQLVNFTKYVKIKNKLDQIYKEFDEKTNEKNQCDSPKENQINVESLNKKVDEVIRTTTFDNYQKILNYQATKKFIELNKFYFNLPKSLKRCLTNNDFNEFIIEKGLTLRRRFNQSSDASQSLVIKRIWTQIENLLVTYKDLIWNSLIQPQETILSLFSKLLNLENFIKNTTSSSNENPILRWMSIKMNGFQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNTIYLNLNCQPSSQGLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLDGTYQNSIINEKRKENILIGDSNIIESYEEFITSVSQNLISSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLAQLNITTNGITILRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQEIVFQEVSIKTTRDLLFAYEKLPIINYPSKQLLTGIEIQQIISMEAVLEAILKNAAKDKDNPRNSHTILTLTNLQYFRECAFPNILQYFDDAFEKNLELFSLLSKMESSIFGNYLSDLK | |||||||||||||
6 | 3cnfB | 0.08 | 0.08 | 2.93 | 0.94 | FFAS-3D | ----RPELAFDHDHIIRCLMLAAANYPNVIRPVSEKRYFPENLEQNQSAARLARASEADISSIHLAIAREVSPMFNVHEPTEFNRIKGDIQNVLLLFFSRW---YPVEYGIFVQRGATYTINAAGEFEFSGRNEKWDQALYLSEH----------------------------FPALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTNQRGTVTNEFASRFRTIVATLANVVNERA------------------VQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESADFIQTSDAVRQLRALMPTLSTSQ--IRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSKMQNAQIRRIRPDGTVLRYDDQIDIEAFRYFLDELQLRRLSVGLRFNGVRIMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRN-----RVTYTHPPTGMAYPSPTGRPHVHMTINEVDILDIEYTAEVMTPSEGYTQHVDTAPKGKLFHLQFMDGLLRPEASGEDMRLI------------YPLQPISVARSVNHNEVDR | |||||||||||||
7 | 4jrbA2 | 0.14 | 0.01 | 0.42 | 0.34 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGVGITGLIDDVLAILEDLKALFNEKLETSPDFLALYNAIRSPEFQSIVQTLNAMPEY----------------------------------------------------------------- | |||||||||||||
8 | 2nbiA | 0.13 | 0.10 | 3.45 | 1.25 | MUSTER | -QPSDLNPSSQP---SECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNIN-CPRCCATECRPDNPMFTPSPDGSPP------------ICSP-------TMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIE------------------------QCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVL-----PTPQNINCPACCAFECRP-DNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPID-----ACFLPKSD--SARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPPFDDSSRPPDCTDPSVNRPDCDSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPVCSPT---MMPSPLPSPTE----------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4cb8A | 0.13 | 0.04 | 1.55 | 0.49 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDVSIAVVDLLQELTDID--------------------TLHESEEGAEVLIDALVDG--------------------------QVVALLVQNLERLDESV------------------------------------------KEEADGVHNTLAIVENMAEF-------------------------RPEMCTEGAQQGLLQWLLKRLKAKMPFDANKLY-------------SEVLAILLQDNDENRELLGELDGIDVL------------LQQLSVFKRHNPST--------AEEQEMMENLFDSLCSCLSSNRERFLKGEGLQLMNLMLRSSALKVLDHAMIGPE-----------------GTDNCHKFVD--ILGLRTIFPLF--------------------------- | |||||||||||||
10 | 2pffB | 0.17 | 0.13 | 4.29 | 0.86 | HHsearch-2 | -----MDA----------------YSTRPLTLSHGSLEHVLLVPTAS----FF-IASQLQEQFNKILPEPPTTFLGYVSSLVEPSK-VGQFDQVLNLCLNCYGNDIHALAAKLLQENDT--------------TL-VKTKELNYITARI--------MAKRPFDKKSNSALF----R--AVGEGNAQLVAIFGGQGNT------------------------DDYFEELRDLYQGDLIKFSAELIRTTLD---AEKVQGLNILEWLENPSNTPDKD---YLLSIPISCPLIG----------VIQLAHYVVT-AKL--------LGFTPGELRSY----------LKGATGHSQGLVT-AVAIA--ETDSWESFFVSVRKAITVLFFIGVRCYEAY---PNTSLPPSILEDSLEN-NEGVPSPMLSLTQQVQDYVNKTNSHLPAGKQVISLV--NGAKNLVSGPPQ--SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFS--NRFLPVASPFHSHL---------LVPASDLINKDLVKN--NVSFNADIQI---P----VYDTFDGSDLR--------------VLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGASGLGVLTHRNKDIVAGTLDIN-PD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |