Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DYFSNKGKFIRRTETKTNNIYISINGKNILPSQLDLKIKRNRQVMANIVGHYATAVGISYWGKGKMAVGRNPQGMVGIADTKNEAELAATRGANITISVYKGHISRFMNNYENLQSSLYHESIHKFFSLRGDYSDNTSLGHVMKVHIKQFENEHFKSATQEFQQAIIGQAAIYLTAALRDSKTRGQVPGAIKKINTAIRNTPYELV |
1 | 1vt4I3 | 0.12 | 0.07 | 2.55 | 0.20 | HHWb | | ----------------------------------------EYALHRSIVDHYNIPKTFDS----------------------------------------DDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFL--DFRFLEQKIRHDSWNASG--SILNTLQQLKFYKPYICDNDKYERLVNAILDFLPKIEENLICSKY |
2 | 2q83A | 0.09 | 0.08 | 2.99 | 0.72 | SPARKS-K | | WDVQAE----KIDVIQALVWKVHTDSGAVCLKRIHRPE-KKALFSIFAQDYLAKKGNVPG-----------------ILPNKKGSLYSKHGSFLFVVYDWEGRPFELTVDLEFIKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQETWKLAEAPFSQLYLQEIDGFIEDGLRIKDLQSTYVPWTEQLKKSPNLCHQDYG |
3 | 2wuiA | 0.10 | 0.07 | 2.52 | 0.71 | FFAS-3D | | ------------------------------------SQKTRDGILDAAERVFLEK-GVGTTAMADLADA---------AGVSRGAVYGH------------------YKNKIEVCLAMCDRAFGQIEVPDENARVPDILLRAGMGFLRQCCEEPLLRRRELLEKQGQRFGLRQIRRAVERGELPARLDRMFRAGLDSLRSSPYLLL |
4 | 1vt4I3 | 0.12 | 0.07 | 2.55 | 0.20 | HHpred | | ----------------------------------------EYALHRSIVDHYNIPKTFDS----------------------------------------DDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFL--DFRFLEQKIRHDSWNASG--SILNTLQQLKFYKPYICDNDKYERLVNAILDFLPKIEENLICSKY |
5 | 3v7oB | 0.13 | 0.11 | 3.87 | 0.66 | MUSTER | | --------------ETHINLKVSDGSSEI---FFKIKKTTP---LRRLMEAFAKRQGKEMDSDGIRIQADQDNDIIEAHREQIGGL---TLAVLLQIAEHWATRDLRQIEDSKLRALLTLCAVLTRK------FSKSQLGLLCETHLRHEGLGQ-ADSVLEVYQRLHSDKGGNFEAALWQQWDRQSLIMFISAFLNIALQIPCESS |
6 | 2g47A | 0.09 | 0.07 | 2.58 | 0.67 | CNFpred | | ------GWFVYQQRNNNCGIEIYYQTDMQSTSENM-----FLELFCQIISEPCFN---TLRTKEQLG------YIVFSGPRRANGIQGL----RFIIQSEK-----PPHYLESRVEAFLITMEKSIEDM-----TEEAFQKHIQALAIRRLDK---------PKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKTL--------- |
7 | 1vt4I3 | 0.12 | 0.07 | 2.55 | 0.84 | HHsearch-2 | | ----------------------------------------EYALHRSIVDHYNIPKTFDS----------------------------------------DDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFL--DFRFLEQKIRHDSWNASG--SILNTLQQLKFYKPYICDNDKYERLVNAILDFLPKIEENLICSKY |
8 | 1ciiA2 | 0.12 | 0.11 | 3.80 | 0.69 | Neff-PPAS | | ---------------ALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNPEKFPGRSSTNDSIVVSGDPRFA---GTIKITTSAVIDNRANLNYLLSHLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIR |
9 | 1vt4I3 | 0.13 | 0.07 | 2.54 | 0.61 | HHsearch | | ----------------------------------------EYALHRSIVDHYNIPK------------TFDS----------------------------DDLIPPYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFL--DFRFLEQKIRHDSWNASG--SILNTLQQLKFYKPYICDNDKYERLVNAILDFLPKIEENLICSK- |
10 | 3fewX | 0.09 | 0.09 | 3.49 | 0.62 | SP3 | | VTLNDNGRAIGILRTGVRPYVGSEKAKAGIMEKINHKTPEEIYEALGFNKDESQRQEKAKQQAEDAWDRLPPNVRKFDVDVEQFHYLVVLDDYGNVLSVTRTGVRPYVGSEKAKAGIMDKVDHKTPEEIYEALGFNNEEPQRQNQAKKAAYDYSFSMNRDRIQSDVLNKAAEVISDIGNKDYLGDAYKSLAREIADDVKNFGKTIR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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