>PF15623 (278 residues) MSATGDQDPIQEDRKAPVSQERAQAEAGGDREAGDSGPDSGDMVPVAEVAGVTGPTRGLG EEEGEQAAGLAAAPVVRNPEEDSEIRIEEEEEEEEEERNEAGNFDLVAATRRYPIIGFRV EFLDMVHSLLHRIYHNDHILIGMRGGRLMRRPRTAAPSGSNEPALLLVRERLGVGAMGPE GEGLGLLQEAASVPEPEVPADQAEMTREPAEESAEEASEEHAEEAAEEELAEEAAEEPAT EEAAAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MSATGDQDPIQEDRKAPVSQERAQAEAGGDREAGDSGPDSGDMVPVAEVAGVTGPTRGLGEEEGEQAAGLAAAPVVRNPEEDSEIRIEEEEEEEEEERNEAGNFDLVAATRRYPIIGFRVEFLDMVHSLLHRIYHNDHILIGMRGGRLMRRPRTAAPSGSNEPALLLVRERLGVGAMGPEGEGLGLLQEAASVPEPEVPADQAEMTREPAEESAEEASEEHAEEAAEEELAEEAAEEPATEEAAAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDE | |||||||||||||||||||
1 | 4mvdB | 0.09 | 0.08 | 2.89 | 1.03 | SPARKS-K | --GLRQPAPFSDEIEV----------DFSKPYVRVTMEEACRGTPRPVRVYADGIFDLFHS--GHARALMQAKNLFPNTYLIVGVCS----DELTHNFKGFTVMNE-----------------NERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHR-------IDFVAHDDIPYSSAGSDDVYKHIKEMFAPTQRTEITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLWEEKSREFIGSF | |||||||||||||
2 | 2tmaA | 0.13 | 0.13 | 4.59 | 1.80 | Neff-PPAS | MQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLED-ELYAQKLKYKAISEELDHALNDMTSI | |||||||||||||
3 | 5gaoE | 0.14 | 0.13 | 4.28 | 1.16 | PROSPECTOR2 | AAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEAYKKLSQKFHGTKSNKK | |||||||||||||
4 | 5yz0C | 0.10 | 0.10 | 3.68 | 0.93 | SPARKS-K | EPPAPRPGPPPGTGHPPFSAAADPDDPFGAHGDF-TADDLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKGKNRETVPI---KDNFELEVLQAQYKELKEKMKVMEEEVIKILRDSLHQTESVLEEQRRSH------FLLEQEKTQALSDKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSPEACSPQFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEDSWRQRSNTQGS | |||||||||||||
5 | 5hmoA | 0.26 | 0.09 | 2.67 | 0.55 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLAEKRAEEEKRKREEEEKRKREEEERERERERREAELRAQQEEAARKQRELEAQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKERQ | |||||||||||||
6 | 2j7wA1 | 0.12 | 0.07 | 2.53 | 0.41 | HHpred | -------------------------------------------------SGV----EGEGHKLGYILRDISKMYADDTAGWDTRITEDDLH----NEEKI---IQQ--------MDPE---HRQLANAIFKLTYQNKVVKVRPTTGTVISRKDQRGSGQVGTLNTFTNM---EALVRQMEGEGVLTKADLVVKPIDD---RFANA---L------LA---------LNDMGKDIPQWQPSKGWHDWQQVPFCSHHFH--------------------- | |||||||||||||
7 | 5cwpA | 0.18 | 0.14 | 4.59 | 0.82 | MUSTER | MSS--DEEEARE-----IERAKEAAERAQEAAERTGDPRVRELA---------------RELKRLAQEAAEEVKRDPSSS-------DVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQ-----------------RNPSSSDVNEALKLIVEAIEAA-------VRALEAAERTGDPEVRELARELVRLAV-EAAEEVQRNPSSEEVNEAL--KKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRD | |||||||||||||
8 | 3pihA | 0.23 | 0.05 | 1.46 | 0.59 | CNFpred | --------------------------------------------------------------GEAQRIKLASELRKRD-------------------------TGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDNTVIVIEH--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 1vt4I3 | 0.15 | 0.08 | 2.53 | 0.86 | HHsearch-2 | ------------------------------------------------------------------EYALHRS-----IVDHYNIPKTFDSDDQYFYSHIGHHLKNIEHPER--MTLFRMVFLDFRFLE-QKIRH-----------------DSTAWNAS--GSILNTLQQLK-----------------FYKPY------I-----CDNDPKYERLVN----------A----------ILDFLPKIEENLICSKYTDLLRIAEDEAIFEEAHKQVQ | |||||||||||||
10 | 5yz0C | 0.09 | 0.09 | 3.33 | 1.40 | Neff-PPAS | -PPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSPQFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |