Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | LKLLEDEFIIDESERSFASRSWITVPRKAGPLKQCTVYPAESSALLQSKKSREKHHNVSPTTLTSDKHSDTDYPIEKSQPSEQKRLGRSCALTNELENHYRSTKYEMYYENAEKSSGKKRTIKQKQRRKFKDSVLEEQVDMEQSKDKNINMSRITQGKLQRNSDXNMEKCEEMINVDISKKQMLPVGSKKNSTNVPYTETQKKDKEYKKKHFPSGSKKNKLVPEEVTSTITRSRRISRRPSNWWVVKSEQSLVYSNSSRRNELSV |
1 | 5jcss | 0.09 | 0.09 | 3.42 | 1.61 | SPARKS-K | | AADCFAGAIGEFKALQAIGESLDIASSRISLFTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRQISVCIQMTEPVLLVGELAKMLAKKLTVIVSQQTEKPKTVAVPIQENFETLFTFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEGSLVKTIR-----AGEWLLLDEVNLATADEPDSRSILL- |
2 | 2tmaA | 0.08 | 0.08 | 3.10 | 1.15 | MUSTER | | MQMLKLD--KENALDRAEQAE-----ADKKAAEDRSKQLEDELVSLQ-KKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATLQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYLSDKLKEAETRAEFAERSVTK---IDDLEDELYAQKLKYKAISE |
3 | 2tmaA | 0.08 | 0.08 | 3.14 | 2.77 | Neff-PPAS | | MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL |
4 | 5gaoE | 0.02 | 0.02 | 1.59 | 1.00 | PROSPECTOR2 | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT---TKEAYKKLSQKFHGTKSNKK |
5 | 6em5m | 0.07 | 0.06 | 2.70 | 1.38 | SPARKS-K | | GKRIMRPAKGSALDQLLDSIEWTGLLDKNSG-SSLNLTKEELELISKIQRNEQTDDSINPPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAIREGRIIPPKKLKEMKEKEKIENTETNDHVMHLRAPKLPSPEEKEAWENTEYSERERNFIPQKYSALRKVPGYGESIRERFERSLDLYL-APRVRKNKLNIDPNSLIPELPSPKDLRPFP---IRCSTIYAGHKGKV-RTLSIDPS-GLWLATGSDDGTVILTGREVYRTTL- |
6 | 5mrcVV | 0.13 | 0.10 | 3.39 | 0.45 | FFAS-3D | | ---------------KYGFKS-GVFPTTRSILKSPTTKQTDIINKVKSPKPKGVLGIGYAKGVKHPKGSHRLSPIAKTVAEPQSIKSSNGS-AQKVRLQKAELRRKFLIEAFRKEEARLLHKHEYLQKRTKELEKAKELELEKLNKEKRNRSPEESELLKLKRNYNRSLLNFQAH----KKKLNELLNLYHVANEFIVTESQLLKKIDKVFNDETEE------------------------------------------------ |
7 | 2w00B | 0.16 | 0.12 | 4.14 | 0.39 | HHpred | | --PVYNVFIFDECHRSQFGEAQKNL-KKKFKQFGFTGTPIETTASVFGR----ELHSYVITDAIRDEKVLKFKVDYNDVRPQFK------SLETEDEKKLSAA--------ENQQAFLHPRIQEITSKGFNA-LAVSTFKRLQEEYKPLRISFAAIGEISDEDSSAKEFLDAAIREY---NSH--FK-----TNFSTDSNGQNYYRDLAQRVKNQDIDLLIVPTLNTLFVGL-QAFSR--------------------------- |
8 | 2atyA | 0.06 | 0.06 | 2.73 | 0.97 | MUSTER | | TPIAVTVIRYSSGTFRLIGEKSLLCITKDKVDPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDACKTNFSMNGNKSQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADVPRDCGCKPCICTVPEVSSVFIFPPKPKDTITLTPKVTCVVVDISKDDPEVQFSDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGAAFPAPIEKTISKTKGRPKAPQLYTIPPPMITDFFPEDITVEAENYKNTQPIMNTNESYF |
9 | 2pffB | 0.22 | 0.21 | 6.55 | 0.66 | HHsearch-2 | | SQLLIKNYITAMAKRPFDSALFRAVGEGNAQLVQGTDYFEELRDLYQTKFSAETLSELIRTTLDAEKVFTQGLNILENTPDKDYLIPISCPLIGVIQLAHTPGELRSYLKGATGHSQGLVAIAETDSWESFFVSVFLEDSLENNEGVPSPMSNLTQEQVQ--------DYVNKTNS------HLPAGKQVEISSGPPQSLYGLNLTLRKAKAPSGLFLPVASPFHSHLLVPASDLINKDLVKNNVSKDIQIPVYDT-FDGSDLRV |
10 | 5nnvA | 0.09 | 0.08 | 3.00 | 1.95 | Neff-PPAS | | --------------------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSE-----SSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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