Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LVDCFYYELGHSDFVHSFFSTISYHLEKEGWGTKYPLIMNELYNDKLNWNDVSVVKANLIEIEKELSKHTPEQVIWDIDDLSQKPPWGDKISPKVTSLANYFATADGKTFFEVLRTAIDVAEEDKCDLKI |
1 | 5cwcA | 0.10 | 0.10 | 3.70 | 0.62 | SPARKS-K | | AKRKGDDTEEAREAAREAFELVREAAERAGIDSSIKECVENAQRGYDISEACRAAAEAFKRVAEAAKRAGITSIRLIKECVENAQREGYDISEACRAAAEAFKSETLKRAIEEIRKRVEEAQREGNDISE |
2 | 1afvA | 0.11 | 0.11 | 3.85 | 0.62 | FFAS-3D | | LQGQMVHQAISPRTLNAWVKVVEEK----AFSPEVIPMFSALSEG-ATPQDLNTMLAAMQMLKETINE---EAAEWDRLHPQMREPRGSDIAGTTSTLQEQWMTHNGEIYKRWIILGLNKIVRMYSPTSI |
3 | 3bpjC | 0.14 | 0.07 | 2.38 | 0.28 | HHpred | | ----DAMNPSSRDDFTEFGKLLKDKITQYEKSLYYASFLEVLVCISLEIDDLKKITNSLTVLCSEKQKQE------------------------------------------------------------ |
4 | 2lciA | 0.15 | 0.14 | 4.66 | 0.67 | MUSTER | | -MKILILINTNN---DELIKKIKKEVENQGYSDELKKEMKKLAEEKNFEK-ISNDKQLLKEMLELISKLGYK-LLLQDQDENELEEFKRKIESQ----YEVRKVTDDEEALKIVREFMQKAGSLEHHHHH |
5 | 3thwB | 0.08 | 0.05 | 2.11 | 0.53 | CNFpred | | -------------VFGQIENHLRKL-------PDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQAII-------------------------PAVNSHIQSDLLRTVILEIPELLSPVEHYLKILNE |
6 | 1vt4I3 | 0.08 | 0.07 | 2.69 | 0.55 | HHsearch-2 | | ----------EYALHRSIVDNIPKTFDSDDLPYLDQYFYSHIGH-HLKNIEHPERMTLFLDFRFLEQKIRHDS-----------TAWNASGS-ILNTLYKPYICDNDPKYERLVNAILDFLPKIEENLIC |
7 | 5ywjA | 0.11 | 0.09 | 3.33 | 0.61 | Neff-PPAS | | -----------LGFYKQYKALSEYIDKKYKLSLNDLAVLDLTMKHCKDEK---VLMQSFLKTAMDELDLSRTKLLVSIRRLIEKERLSKVRSSKDERKIYIYLNNDDISKFNALFEDVEQFLN------- |
8 | 3bpjC | 0.13 | 0.07 | 2.41 | 0.34 | HHsearch | | --GIDAMNPSSRDDFTEFGKLLKDKITQYEKSLYYASFLEVLVCISLEIDDLKKITNSLTVLCSEKQKQEKQ---------------------------------------------------------- |
9 | 2i7aA | 0.14 | 0.13 | 4.48 | 0.61 | SP3 | | LVPGSDID------ATQLQGLLNQELLDMFSLDECRSLVALMVNGRLDQEEFARLWKRLVHYQHVFQKVQTSPGVLLSSDLNTDFLRGIFISRELHLVTLRYSDSVGRVSFPSLVCFLMRLEAMAKGLYL |
10 | 2mx8A | 0.07 | 0.06 | 2.56 | 0.53 | PROSPECTOR2 | | GSGNSQPIWTNPNAAMTMTNNLVQCASRSGVLTAMGMMADSVNGPNPPQHRLRAMNTAMAEVAEVVATSPPQSYSAVLNTIG-------------ACLRESMMQATGNAFTNEVMQLVKMSADSANEVST |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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