Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MFEYHGWVTIQASPSGDDDAALLERIVERVHRAVRDFDDGDLVDLRWAAGVPMLHLGGMDKHGTAIAPELVDLFTRVGDLAPGSYGLLHVWDDQDPEHDNEFKVYRMARGLVTERADEHLSPVAPTVLD |
1 | 5a8jA1 | 0.10 | 0.10 | 3.71 | 0.72 | SPARKS-K | | --SGIHYVVMIDNSPSMKKENKINLALSSASRLVQDIIPGNFISIYLFSNDIETLYEGLKSIKMGYTTNLHKAITKVLEKFKIPVKIILLSDGKPTDKRYQLITIGLGEGVFYHINDPSQLPTTLVEQK |
2 | 3lucA | 0.13 | 0.10 | 3.48 | 0.65 | FFAS-3D | | ------WAIACFAPQRQCTEVHLKSFTEQLRKISRDIQGQPCFCKY-----------------AQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPDTVLGMATQCVQMKNVQRTTPQTLS-------- |
3 | 5l20A | 0.12 | 0.09 | 3.02 | 0.29 | HHpred | | ----TEQTVFMYLPWSDNLTSNFYQNISDLESVVEKNIKDTLFELAYENGKSHKTLKNYTDPAYTTAEGITSILNDVQRYSPTRYSMVIG-CHGMGWI------------------------------- |
4 | 4c7vA1 | 0.21 | 0.19 | 5.93 | 0.67 | MUSTER | | RFEAYGWQYILVEDGFN-----LEEIDKAIVQAKAESDKPTIIEIKTTIGYGSENQGTHKVHGSPLGEEGVAHAKEVYNWNYPPF-------TVPEEVSQRFKECLQDKGVKAENKNEMFEAYKKEYSD |
5 | 4clfA | 0.06 | 0.05 | 2.32 | 0.64 | CNFpred | | VTIVFVNLMFEDQDKAEEIGPAIQDAYMHITSVLKIF-QGQINKVFMFDGCSFLCVFGFPGEKVDELTHALECAMDIFDFCSQIQTVSIGVAS-----GIVFCGIVGHTVRHEYTV------------- |
6 | 2f7lA3 | 0.12 | 0.07 | 2.46 | 0.35 | HHsearch-2 | | KYYLV-KTKVDLKP----GLM-VEEIYKKILEVYSKIDKDFWFLVRKSGTEPIIRIMAEAKDE----NVANNLVNELKKIVEGK--------------------------------------------- |
7 | 4pe6A1 | 0.15 | 0.12 | 4.16 | 0.64 | Neff-PPAS | | -----PFIALSNGFIGNGWRQTIAKFEEAAKQAQADGLIGKYKVVNA--------------PGNNSATEQVAQIKSLLLQKPD--ALLINPASPTA-LQPVIQQACDAGVKVVVFDSAIDAPCAYIL-- |
8 | 5l20A | 0.11 | 0.09 | 3.07 | 0.37 | HHsearch | | --VPTEQTVFMYLPWSDNLTSNFYQNISDLESVVEKNIKDTLFELAYENGKSHKTLKNYTDPAYTTAEGITSILNDVQRYSPTRYSMVIG-CHGMGWIPVSN--------------------------- |
9 | 1o9hA | 0.10 | 0.09 | 3.16 | 0.66 | SP3 | | -------RREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDVVLTDRTHWEGQVPAQPVAGLLRSLASALAHAVIAVTDRSRKIPVAPGTRSAVLVRAADVLEAGP------------ |
10 | 5xj1A2 | 0.10 | 0.09 | 3.47 | 0.53 | PROSPECTOR2 | | VRRVNGVLETGFFRKNSHNDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHYSTRPKVFRVDQLIEQVIKQFPEIVSVMQNINDQNTNAIFGKEWRTLYQDYITDQMLGNIAG-----PA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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