Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MFAVQPGPPEPPFLGGPPASVSQHDYEPDSNSNFVTSTYDANENWSRALAGARASDLGGRELTLTQNLPSDNQAVLGKRQPSAPGLLGSPPDDFFLPTVGEIRSPPEGAELPMAAGPKPEKDVRVEATAAAGSPLEDVGYASSSLSVDSPDSSPGPSWDTFSPCPGPPDPGPAPDTFLPTVTQAVQQLLARERYKEQEKEKHHVHLVMYRRLALLQWIRGLQCRLAGQQARLQESFDTILDNRKELIRGLQQGLPPRPQDR |
1 | 6d4hA1 | 0.07 | 0.07 | 2.94 | 1.15 | MUSTER | | HLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSTQKVLSFTTTTLDDILKSFSDVS---VIRVASGYLLMLAYACLTML---RWDCSKSQGA |
2 | 2tmaA | 0.07 | 0.07 | 2.72 | 1.25 | Neff-PPAS | | NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKED---------KYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYK |
3 | 2kr0A | 0.14 | 0.14 | 4.81 | 1.29 | PROSPECTOR2 | | MTTSGALFPSLVPGSRGASNKYKGTTTDDSLIHFCNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPNVPAGPAGGQQVDLAEIMAPILANADVQERLLPADEIQF----QQALGMFSAALASPLMCQFGLPAEAVEAANKDVEAFAKAMQNNAKPEQKEG |
4 | 5yfpH | 0.11 | 0.11 | 3.87 | 0.99 | SPARKS-K | | VLDQCTKIAEKRLQLQDQIDQERMRRDR-------SSVLILEKFWDTELDQQKFINSTKGRHILMNSILNDLVLIADKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLLFKFSNSNRDADECSRLLDVIRKAKDDDIFHVEESFRYLQSTQQTPGRENNRKRRSMGGSITPDMSSTAQRLESAVETLLDIESQLEDLLNLISLKIEQRREAISSKLSQSILKSGTENMIKLEQALDLFLQNRSNFIQDLILQIVDNPTNY |
5 | 4mvdB | 0.09 | 0.07 | 2.75 | 0.61 | FFAS-3D | | --------------------------------------------------RQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVSDELTHNFKGFTVMNENERYDAVQHCRRNAPWTLTPEFLAEHRIDFVQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSREFIGFLEMFGP------ |
6 | 5ijnF | 0.15 | 0.11 | 3.74 | 0.41 | HHpred | | -------------------------------------------KWNQLQAFWG-TGDGLVVLVFNK--KETE--IRSQQQQLVESLHKVLGGQTLTVNVEGTKTLPDDQTVVIYV-----VERSPNGTSRRVPATTLYAHQLQQLGVTLPAQVDPIIWEQAK------VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIEDISELQKIAQYKRKLMDLSHRTLQ-----VLIKQEIQRK--SGYAIQAD-- |
7 | 2z6bA | 0.10 | 0.10 | 3.64 | 1.07 | MUSTER | | LYGGIVREKPNRLEGSDPTGQYPRRLGNDTNVL-VGYDSSSNVIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDTEGY-----------PTIGIGHLIMKQPVRDMAQINKVLSKQVGREITGNPGSITMEEATTLFERDLADMQRDIKSHSKVGPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAGDWEKAYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLLAM |
8 | 2j68A | 0.14 | 0.05 | 1.56 | 0.55 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPKFMDSLNTFLTRERAIAELRQVRTLARLACNHTAVARRIPLLEQELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTI |
9 | 5c3lA | 0.19 | 0.08 | 2.47 | 0.47 | HHsearch-2 | | ----------------------------------------------------------------------------------------------------------------------------------------------------SPVQIKQ-LIQNPLSGVDPWVDNPDPERLIPVPMIGFKELLRRLEVQDQMTKQHQSRLDISEDIGELQKIGQYKRKLMELSHRVLQV-----LIKQEIQRK--SGFAIQAEEE |
10 | 5cwpA | 0.09 | 0.08 | 3.03 | 1.01 | Neff-PPAS | | -----------------------------------SDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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