Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NPCDCTTAEKDKLQREVTNKCKGGIMKKCTDTDNCGSLISKEAQFRECMNARIKINTKCFKGGDAGHKLQVQQAINGMINCQN |
1 | 5cwlA1 | 0.10 | 0.08 | 3.16 | 0.84 | SPARKS-K | | -TTEDERRELEKVARKAIEAAREG---------NTDEVREQLQRALEIARESARVAIEAARRGNTDAVREALEVALEIARESG |
2 | 3gi7A | 0.15 | 0.14 | 4.87 | 0.73 | FFAS-3D | | NVETCAAFNKQVAERELQSAYDEERRDQFGDEAGLSRIEAAEKVWSQLRDADCKVETHAEQPGSNAYQIAWNSCIAQRSD--- |
3 | 2fy3A2 | 0.11 | 0.08 | 3.07 | 0.22 | HHpred | | -IRSATPEALAFVRAVT----DHKA--A-------VPASEKLLLLKDAIRAQTAYTVMAITGAIDNHLLALRELARAMCA--- |
4 | 4nq0A2 | 0.11 | 0.10 | 3.49 | 0.93 | MUSTER | | -----AEQVTEKVIQAEFLVCDALRW---VDQVPAKDKLKRFKHAKALLEKHMTTRPK-DSELQQARLAQIQDDIDEVQENQQ |
5 | 5h6iA | 0.09 | 0.07 | 2.77 | 0.51 | CNFpred | | -------TSVEKLKTSLRANS--------ETVYDLNSIGSRVEALTDVIEAITFSTQHLANKVSQANIDMGFGITKLVIRILD |
6 | 4ofzA | 0.06 | 0.04 | 1.55 | 0.53 | HHsearch-2 | | -----------------------------------QTVDDFKNLMYKMQETRRAIVFALLNELTKDDVEILKRAYEKLTDNFQ |
7 | 5cwlA2 | 0.06 | 0.06 | 2.61 | 0.79 | Neff-PPAS | | -TTEAVKLALEVVARVAIEAARRGNTDAVREAEVALEIARESEAVRLALEVVKRVSDEAKKQGNEDAVKEAEEVRKKIEEESG |
8 | 4ndsA | 0.13 | 0.12 | 4.20 | 0.45 | HHsearch | | PGSAFE--SKDRLRSFALLYCRNYKPPGQGFGYASAVSTHGWETEAQCINTFEQIITSCHGQSNGGTLELN-SGRLSLAFGN- |
9 | 5cwjA2 | 0.09 | 0.08 | 3.20 | 0.71 | SP3 | | --QD-SEVLEEAIRVILRIAKESGSEEALRQARAVAEIAKEPRVLEEAIRVIRQIAEES---GSEEARRQAERAEEEIRRRAQ |
10 | 1w9rA | 0.06 | 0.06 | 2.63 | 0.47 | PROSPECTOR2 | | GSHMPEEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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