>PF15509 (523 residues) LLSGPEDLVDNILPLTLEEIQVNPEGFLLEDKPVAENAGVIKTNTLQSQESLTASLVSAP CKEKLTQDQFVDLSFPSQFVNTNVQLVQLNTEDTVITKSVNNVHATDAMQEVKSVEFEGT VVLEKDAPLKQFLSPKTEKLKPEQLVTSQVSNLKKEETAAFSQTITAKSLQSPSLKENQK KPFVGSWVKGLLSKGASFMPPCVSAHNRNTITDLQPSVKGASNFGGFKTKGIKQKANRTS KKAHKCSSKPPPVSNPPPSLPSGSPASQLHASVTAHSEVLKKCENTSSGAHLNHSSHGSE GGVSSANHGDLVEGQIHKLRLKLLKKLKAKKKKLAALMSSPQNGTHPSENLEHGSHCGSP NDCGSIEDLLKELQDQIDIADNKSGGTTAPSISSYSSQTHEEILAELLSPTTIVSAELSE NGEADFRYLEMGDNHIPAPVPSDLNDTPQNAHLRQDHNYCSPTKKTQSEVQPDSFINNAG VRTLNLESSMKTDIFDEFFSTSALNSLANDTLDLPHFDEYLFE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LLSGPEDLVDNILPLTLEEIQVNPEGFLLEDKPVAENAGVIKTNTLQSQESLTASLVSAPCKEKLTQDQFVDLSFPSQFVNTNVQLVQLNTEDTVITKSVNNVHATDAMQEVKSVEFEGTVVLEKDAPLKQFLSPKTEKLKPEQLVTSQVSNLKKEETAAFSQTITAKSLQSPSLKENQKKPFVGSWVKGLLSKGASFMPPCVSAHNRNTITDLQPSVKGASNFGGFKTKGIKQKANRTSKKAHKCSSKPPPVSNPPPSLPSGSPASQLHASVTAHSEVLKKCENTSSGAHLNHSSHGSEGGVSSANHGDLVEGQIHKLRLKLLKKLKAKKKKLAALMSSPQNGTHPSENLEHGSHCGSPNDCGSIEDLLKELQDQIDIADNKSGGTTAPSISSYSSQTHEEILAELLSPTTIVSAELSENGEADFRYLEMGDNHIPAPVPSDLNDTPQNAHLRQDHNYCSPTKKTQSEVQPDSFINNAGVRTLNLESSMKTDIFDEFFSTSALNSLANDTLDLPHFDEYLFE | |||||||||||||||||||
1 | 5jcss | 0.12 | 0.11 | 3.88 | 1.55 | SPARKS-K | VKEG--------RWVLIEDIDKAPTDSLLEKRELIPSRGE---TVKAANGFQLISTVRINEDHQKDSSNKIYN--LNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPK-LIDSYKNVKSIYMNTKFISLNKGAHTRVDILFKNNGINKPDQLIQSSVYDSIADCFAGAIGEFKALEPIIQAIGESLDIASS--------RISLFLTQHVPT---------LENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEVCIQMTEPVLLVGTGKTTVVQQLAKMLAKKLTVINVSQQTETVAVPIQENFETLFNKKNEKNEAYKMAQSILKITNTENENLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEEVNLATADT-LESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPMRSRFTEIYVHSPERDITDLLSIIDKGKYSVSDEWVGNDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTLT | |||||||||||||
2 | 1zvoC | 0.11 | 0.10 | 3.52 | 1.49 | MUSTER | QLQESGPGLVKP-TLSLT---------IVSGGPIRRTGYYWGQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAADTARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPIISGCRHPKDNSPVV-LITGYHPTSVTVTMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPK----AQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFVVGSDLKDAHLT-------------------VAGKVPTGGVEEGLLERHSNGSQSQHSRL-----TLPRSLWNAGTSNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEA--SWLLCEVSGFSPPNILLM--LEDQREVNTSGF------APARPPPQPGSTTFWAWSVLRVPAPPSPQ--------PAT-VVSHEDSRTLLNASRSLE | |||||||||||||
3 | 2cseB | 0.08 | 0.08 | 3.16 | 3.00 | Neff-PPAS | ------TGDGNVFKPSAETSSTAVPSLSLSPGMLNPGGVPIAIGDETSVTSPGALRRMTSKDIDHAIANFTKAEMALEFNREFLDKLRVLSVSPKYSDLLTYVDCYVGVSARQALNNFQKQVPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKEAAVALAKRNGGIQWMDVSEGTVMNEAAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADYNVRTLKIDEATWLRMIPKTMGTLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEPEQLNKTDPEMNYYLLATFIDSAAITPTNMTSAGEVTVKGAVVSEVVPAELIGSYTPESLNASLPNDAARCMIKIDDDAGPDEYSPNSVPIQGQLAISQLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTII | |||||||||||||
4 | 2nbiA | 0.10 | 0.09 | 3.33 | 1.78 | PROSPECTOR2 | QPSDLNPSSQP-----------SECADVLEECPIDECFL---PYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSP------TMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSCTAVGRPDCNVLPFPNNECSPDNPMFTPSPDGSPPNCSP----------TMLPSPSPSAVTVPLTPAPSSAPTR--------QPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDG-----------SPPVCSPTMMPSPLPSPTE | |||||||||||||
5 | 5kcs1w | 0.09 | 0.08 | 3.04 | 1.32 | SPARKS-K | IQTGITSFQWENTKVNI----IDTDGAIL----LISAKDGVQAQTRILHALRKMGIPTIFFNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESEQWDTVINDDLLEKYMSGKSLEALELEQEESIRFQNCSLFP---LYHGSA----KSNIGIDNLIEVITNKFYSSTHRGPSELC------------GNVFKIEYTKKRQRLA--YIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSINGELCKIDRAYSG-----EIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPE----------------QREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLGK-VQMEVISALLQEKYHV----EIEITEPTVIYM------------ERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYSTPADFRMLAPIVLEQVLKKAGTELPYLQEYLSR | |||||||||||||
6 | 5kcs1w | 0.10 | 0.09 | 3.35 | 0.78 | FFAS-3D | --AGKTTLTESLLYNS---------GAITELGSVDKGTTRTDNTLLERQRGITIQTGITSFQ--WENTKVNIIDTPGHMDLAEVYRSLSVLDGAILLISAKDGVQAQTRHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESEQSGKSLEALELEQEESIRFQNLIEVITNKFYSSTHRGPSEEYTKKRQRLAYIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSINGELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQ-------------REMLLDALLEISDSDPLLRYYVDSTTHEIILSFLGK----VQMEVISALLQEKYHVEIMERPLKNAEYTIHIEVPPNPFW-ASIVSPLPLGSGMQNQSFQNAVGIRYGCEQGYGWNVTDCKICFKYGLYYSPVSTLLEPYLSPKYCANIVDTQLKNNEVILSGEIPARC--IQEY--RSDLTFFTNGLTELKGYHV---- | |||||||||||||
7 | 3nj2A | 0.17 | 0.04 | 1.20 | 0.34 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETNTLLVEQPFLQSLVQQIRAYDH---------YGVYRTWTDELVIAPYVPKKKRR--EISLEGDIDKLRILCYFRAIAALI-EKETGL-----------LCQVVVDLNHEGFGALVVSRSLAHRFGFDTLEKLN------------------------------ | |||||||||||||
8 | 2rcjT | 0.11 | 0.10 | 3.71 | 1.46 | MUSTER | VLTQPPSASGTP-RVTIS--TGTSSGSIT-YQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDEASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYS---VTHEGSTVEKTVAPTECSASTKGPS-VFPLAPSSKSTSG-LVKDYFPQPVTNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVT--VVVDVSHEDPQVK---NWYVDGVQVHNAKTKPREQQY-NSTYRVVSVLTVLHQNWLDGKESNKALPAPIEKTISKAKG------PREPQVYTLPPSREEMTKNQVSLTLVKGFYPSDIAVE----ESNGQPENNYKTTPPVLDSDGSFFLYSKLT---VDKSRWQQGNV-------FSCSV----MHEALHNHYTQKSLSL | |||||||||||||
9 | 3qgbA | 0.15 | 0.03 | 1.03 | 0.41 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTKRQEKLKNFISSQMTDMCLD----------------------KFACYVIQSSLQNMDLS----------------------LACKLVQALPRD-------------ARLIAICVDQN--------------------------------------ANHVIQKVVAVIPLKN--WEFIVDFVATPEHLRQICSDK--GCRVVQTIIE | |||||||||||||
10 | 2pffB | 0.13 | 0.10 | 3.50 | 0.88 | HHsearch-2 | ------------------------------------------MDAYSTRPL-------TLSHGSL------EHVLLVPTASFFIASQLQEQFNK--ILPEPTEADDEPTTPYVSSLVEPSKVGQFDQVLNLCLTEENCYLEGNDKLLQENDTTLVKTKELIKNYITAR--------IMAKRPFD---------------KKSNSA--------------------LFRAVGEGNAQLV-AIFGGQGN-TDD------YFEELR--DLYQTYHVLVGDETLSELRTTLDAEVFTQGLNILENPSPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGELRSYLKGATHSQGLVTAIAET---DSWESFFSVRKAILFFIGVRCYEAY----PNTSLPP-SILEDSL-ENGVPSPMLSISNLTQ-EQVQDYVNKTNSHLPAGKQVEISLVNGAKNLSRKAKAPSGLDQSRIPFSEKLKFSNRFLPVASPLVPASDLINKDLVKNN-VSFNAKDI-QIPVYDTFDLR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |