Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VVAVTDYHIHGPLELLPHRNDRLQVFCRESEERRFGRLQNGQQGQPLAKTMTRHVGISEPKPLILCGNRAYGKSLISQ |
1 | 6edfA | 0.15 | 0.14 | 4.72 | 2.29 | SPARKS-K | | FVALYDYEARTEDDISVHKGEKVQILNSSEGDWWEVRSLTGETGYVPSNYVAPVDGSAAMGPVLRLRAFYN------- |
2 | 6edfA | 0.17 | 0.14 | 4.63 | 1.57 | FFAS-3D | | FVALYDYEARTEDDISVHKGEKVQILNSSEGDWWEVRSLTGETGYVPSNYVAPVDGSAAMGPVL-------------- |
3 | 1k9aB | 0.17 | 0.17 | 5.50 | 1.56 | HHpred | | CIAKYNFHGTAEQDLPFCKGDVLTIVAVKDPNWYKAKNKVGREGIIPANYVQKHGKITREQAERLLYPPETGLFLVRE |
4 | 2eyzA1 | 0.17 | 0.17 | 5.46 | 1.85 | MUSTER | | VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSH---PQ |
5 | 4esrA | 0.31 | 0.24 | 7.36 | 1.53 | CNFpred | | VVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASETLYQELP----------------- |
6 | 1k9aB | 0.15 | 0.15 | 5.15 | 0.68 | HHsearch-2 | | CIAKYNFHGTAEQDLPFCKGDVLTIVAVKDPNWYKAKNKVGREGIIPANYVQKRGKITREQAERLLYPPETGLFLVRE |
7 | 6edfA | 0.15 | 0.14 | 4.72 | 2.32 | Neff-PPAS | | FVALYDYEARTEDDISVHKGEKVQILNSSEGDWWEVRSTTGETGYVPSNYVAPVDGSAAMGPVLRLRAFYN------- |
8 | 1lckA | 0.18 | 0.18 | 5.82 | 1.02 | HHsearch | | VIALHSYEPSHDGDLGFEKGEQLRILEQ-SGEWWKAQSLTGQEGFIPFNFVAKAKNLSRKDAERQLLANTHGSFLIR- |
9 | 2yunA | 0.17 | 0.15 | 5.05 | 0.82 | PROSPECTOR2 | | CKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGS-LNGKKGHFPAAYVEELPSNAGNTA----TKASGPS---SG |
10 | 2eyzA1 | 0.17 | 0.12 | 3.81 | 0.91 | SAM | | VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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