>PF15483 (448 residues) EGRPGTPADDKGDALDYASHLADESGAASVQQLTDPDALGVRRNPSPESCAAEGSGVWAG LEAGPGGRGALALSRGESQPPSAVPLHLGGPEGARPRGNPRRGPKSRSTVRVDRQRPSAK GPGRRPSDPESSDEFGEIQLMRVSICSKERGQAKPNSPEDPGDTPRQPSFHVRENFLHVP GSFLSSAPRGFTSVVERQAVGELDISSSKKMQSVVWGKGGNRPSYPVAAAAAAAAAAAGS LPPATPRKKVAQEKKSLGGASKVTQGRSFPPWGQRVSAAPLEPATFPPISGVPLLGRNKR YSLVPSGSKQSKHTGRSRKKSGPRRTRESEPVVVTGEGSDSNRDTVPKGQLPTHRPGPCC SGMHRGECSSGDLDTRAPEVPGSSAPSALSQGDVMPRGRAPSSDQEPLDHLPRPERLQQP PGTQGCPRCVVLQREIDDLKEQLAAMQS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EGRPGTPADDKGDALDYASHLADESGAASVQQLTDPDALGVRRNPSPESCAAEGSGVWAGLEAGPGGRGALALSRGESQPPSAVPLHLGGPEGARPRGNPRRGPKSRSTVRVDRQRPSAKGPGRRPSDPESSDEFGEIQLMRVSICSKERGQAKPNSPEDPGDTPRQPSFHVRENFLHVPGSFLSSAPRGFTSVVERQAVGELDISSSKKMQSVVWGKGGNRPSYPVAAAAAAAAAAAGSLPPATPRKKVAQEKKSLGGASKVTQGRSFPPWGQRVSAAPLEPATFPPISGVPLLGRNKRYSLVPSGSKQSKHTGRSRKKSGPRRTRESEPVVVTGEGSDSNRDTVPKGQLPTHRPGPCCSGMHRGECSSGDLDTRAPEVPGSSAPSALSQGDVMPRGRAPSSDQEPLDHLPRPERLQQPPGTQGCPRCVVLQREIDDLKEQLAAMQS | |||||||||||||||||||
1 | 4btgA | 0.12 | 0.11 | 4.05 | 1.68 | SPARKS-K | VGKVPPTATLAPSEHELFHHITTDFVCHVLSPFILPDAAYVYRVGRTATYPNFYALRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAATTAFERSRGNFDANLWSPSTPKELDPSARLRNTNGIDQLLFIAYQDMVKQRGRAEVIFSDEESSTIIPWFIEAMSEVPFKLRPINETTSYGQTSAIDHMGQPSHDWQFAKEITAFTPVKLANNSNQVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEA--VSQRGTVNSNGAEMTLG------FPSVVERDYA-LDRDPMVAIAALRTGIVDESLEARASNDHNPEVVVSEHQGVAAEELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSLQAKVLDEASTEFAYEDATIRKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARR | |||||||||||||
2 | 2nbiA | 0.11 | 0.11 | 4.00 | 1.51 | MUSTER | ASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFERPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSP--PVCSPTM------MPSPLP | |||||||||||||
3 | 2cseB | 0.08 | 0.08 | 3.15 | 3.33 | Neff-PPAS | ----VSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKEAAVALAKRNGGIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADYNVRTLKID-EATWLRMIPKTMGTLFQIQVTDNTGTNWHFNLRGGTRVVNLDQIAPMRFVLDLGGKSYKE---TSWDPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEPEQLNKTDPEMNYYLLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVTVKGSLNASLPNDAARCMIDRASKIAEAIKIDDDAGPDEYSPNSVPLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTIITQAAP | |||||||||||||
4 | 2nbiA | 0.08 | 0.08 | 3.06 | 2.47 | PROSPECTOR2 | QPSDLNPSSQPSECADVLEECPIDECF---LPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLGSPPICSPTMMPSPEPSSQPSDCGEVIEEVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPMMPSPLPSP-------------------TE | |||||||||||||
5 | 6ezoI | 0.08 | 0.07 | 2.72 | 1.62 | SPARKS-K | EPPPPLQADQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKA-----AQIKEHLLKSKWCRPTSLNVVRIITSELYRSLG-------DVLRDVDAKALVRSDFLLVYGD-VISNINITRALEEHRLRRKLEKNVSVMTMIFKESSPS--HPTRCHEDNVVVAVDSTTNR--VLHFQKTQGLRRFAFPLSLFQGSSDGVEVRYDLLDCHISICSP-----------QVAQLFTDNFDYQTRDDFVRGLLVNEEILGNQIHMHVTAKEYGARAVCADVIRRWVYPLTPEANSCTHSRHNIYRGPEVSLGHGSILEENVLLGSG------TVIGSNCFITNSVIGPGCHIGDNVVLDQTY-LWQGVRVAAGAQIHQSLLCDNAE---VKERVTLKPRSVLTSQVVVGPNITLPEGSVIS---------------------------- | |||||||||||||
6 | 2akhY | 0.13 | 0.08 | 2.87 | 0.82 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------LDFQSAKGGLGELKRRLLFVIGALVFRIGSFISIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTSLVTGTMFLMWGEQITERGIG-------NGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPNMAGVIPAIFASSGGGTGWNWLTTISLYLQPGQPLYYTALVFNPRETAKSGAFVPGIRPGEQTAKYKVPFYFGGTSLLIVVVVIMDFMAQVQTLM- | |||||||||||||
7 | 2rmsB | 0.23 | 0.02 | 0.77 | 0.37 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALAGLLQMSQGEQTPNC---VASSLPSTSCPDPVSEDPGPGDQSCSGTDT----------------- | |||||||||||||
8 | 2nbiA1 | 0.11 | 0.10 | 3.45 | 1.48 | MUSTER | ------------------------------------QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAP--------SDCGEVIEECPLDTCFLPTSDPARPP-DCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPS----PDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGD-SSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECR-PDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTGRPDCNVLPFPNNIGCPSCCPFECSPDNPTPSPDGSPPNCSPTMLPSPSPSAVTV------------PLTPAPSSAPT | |||||||||||||
9 | 2rmsB | 0.24 | 0.03 | 0.97 | 0.45 | HHsearch-2 | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSTW--LSEAEMIALAGLLQMSQGEQTPNC---VASSLPSTSCPDPVSEDPGPGDQSCSGTDT----------------- | |||||||||||||
10 | 2ocwA | 0.08 | 0.08 | 3.02 | 3.18 | Neff-PPAS | ---YYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVSKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSL---------TLNLVTR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |