Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | CSSESDLSLSVGYFPCEDTFSHENTTSCEDMSPEGPSIHFIPPIQGTWWTESRGRLLGRRDQIQDNPGQFCKLSITLAWDVDVDSNNSDSVANWDLNGDNQWTDKYPKEKKQPTLSKLDSLVQKLEKFLENQKDDEDDDSVFPESAQEEDFQLSSSSSPDIAQDIHQEHTCQDLPKFDPPENEDVIQFPEIPPRLHEHEPVEILSQTTGSQRASTVETSSTSSGQPEEEDTHSGTQAPSCLNFRWVFRWLRQQVLSSLLGRRRPEKATKSPHQLVQKKRPSHRGKRIQPQE |
1 | 2tmaA | 0.07 | 0.07 | 2.68 | 1.92 | Neff-PPAS | | -----------------DAIKKKMQMLKLDKENALDRAE----QAEADKKAAEDRSKQLEDELVSLQKKLKGTEDEL---DKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA |
2 | 2nbiA1 | 0.09 | 0.09 | 3.27 | 1.11 | PROSPECTOR2 | | PSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCP--------------ACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQSSRPLDCTDPAVNRPDCDVLPTPQTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDSPSAVTVPLTPAPSSAPTR |
3 | 5h7iC | 0.10 | 0.10 | 3.52 | 0.91 | SPARKS-K | | ----------VPVIDLNRVSDEEQLLPVVRAILLQHDTFLL---KNYANKAVLDALLAGLTT-KDLPDTSQGFDFT----GTLPLEDDVWLEQYIFDTDPQ--LRFDRKCRNESLCSIYSRLFKLGLFFAQLCKSVVSSAELQDCISTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDE--PDCLLFHTGTLLARWSQGMHTTSPLQIDPRANIVSLTIWPSILRLQDAMKFVKELFTVCETVLSLNALS-RSTGVPPELHVLLPQISSMMKRKIVQDDI |
4 | 4bmlA | 0.05 | 0.04 | 2.02 | 0.50 | FFAS-3D | | -RGGKSKQFMTGKLSAGYHTPGTPIVGDAGIKANEKT---LVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALATHYDARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTI----------------------QTTSGDFNVQYQGDLIVGKLAMGCGSLRTS- |
5 | 4jgwA3 | 0.13 | 0.03 | 0.95 | 0.27 | HHpred | | -------------------------------------------------------VADRLEALESYPPG-----------------ELERTTGVAISVLSTWLASHPEDFGSEVK----GQLDRLESFLLRTGYSA----------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2atyA | 0.12 | 0.11 | 4.03 | 0.89 | MUSTER | | CGSYYSTPIAVGRYSCSGTFRLIGEKSLLCITKDKVDGTKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNQANNMWGPTRLPTFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSVFIFPPKPLTPKVTISKDDPEVQFSDVEVHTAQTQPREEQFNSTFRSVSEIMHQDWLNGAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCM--DITVEW--------QWNGQPAENYKNTQPIMNTNESYFVYSKNVQKSN |
7 | 1qisA | 0.14 | 0.04 | 1.28 | 0.35 | CNFpred | | ---------------------------------------------------------------------------RVGACTLVA-----------------------------DSETVDRAFSQMKAAIRAN---------------------YSNPPAHGASVVAT--------------------------ILSNDALRAIWEQE--------------------------------LTDMRQRIQRMRQLFVNTLQ-------------------------------- |
8 | 2pffB | 0.21 | 0.21 | 6.55 | 0.80 | HHsearch-2 | | AYSTRPLTLSHGSLVPTASFFIFNKILPEPTEPYVSS-LVEPSKVGQFDGNDIHALAAKLLQENDTTLVKIKNYITARIMAKRPFDKKSNSALFRAVGEGNAIFG-GQGNTDDYFEELRDLYQDLETLSELIRTTLDAEKVFTQNTPDKDYLLSICPLIGVIQLAHYV-VTAKLLGFTPGELRSYLKGATSQGLVTAVAIAETDS--WESVRARCYEAYPNTSLPPNNEGVPSPMLSISNLTQEQVQDYVNKQVEISLVNGAK-NLVVSGPPQSTLRKKFSNHSHLLVPAS |
9 | 2bsgA | 0.06 | 0.05 | 2.45 | 1.70 | Neff-PPAS | | --KTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAI---KTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL---- |
10 | 1ka4A4 | 0.17 | 0.04 | 1.36 | 0.45 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLLS-AQLYYHIKK-----------------------DIPDFEEKVAKAEFDPIKAWLREKIHR-WGSIYPPKKAIGEDMDAEYFVRWVK-EK-YL--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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