Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | MGLSHSKTHPRVIKVAPLQNKEVETPSAGRVDFAFNQNLEEKTSYSLARLQDQNKALEGQLPPLQENWYGRYSTASRDMYFDIPLEHRETSIIKRHPPQRLQKLEPIDLPRVITSGRLLSQREARTMHKAKQVLEKKMQTPMYTSENRQYLHKMQMLEMIRKRQEAQMELKKSLHGEARINKQSPSDHKAKKTLQSTPRNDDYDLLTMLPDEILNRGPGNSKNTEFLKHQAVNNYCPWKIGKMETWLHEQEAQGQLLWDSSSSDSDEQGKDEKKPRALVRTRTERIPLFDEFFDQE |
1 | 5dfzA | 0.06 | 0.06 | 2.58 | 1.22 | SPARKS-K | | -------NISLFRANGDSKLIKEYGDGFIPCFFILESIRGEL-LYEVQSGSLRKLSLPKLTGASTMIVLKLVGLWCVLCTYTIDLNKINEDTVLITGTNAPVDLIDGSYTLKLNKLLEYSSQVHEEINEISSKIEDDFLSLKNQNHWYMRTVQKSIETLEKEVLQRKKSKKNIEMAQLESNDLMSQDESINDDYGSIYSRFVQQLIGIFHSTDLFNSDRGYIYLLRQAGESTKHR--EYVYLLFLHLTAIQIFKAMYYGSTSVIDSQY-------PLYFTDQMIS--KHQAKLIKA |
2 | 2tmaA | 0.11 | 0.10 | 3.78 | 2.02 | Neff-PPAS | | ------AIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEE----KMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDH---ALNDMTSI- |
3 | 1sa1E | 0.15 | 0.06 | 2.05 | 1.07 | HHsearch | | ----------------------------------------------------------MEVIEL------NKC--TSGQSFEVILKPPSFD----GVPEFN-----ASLPRRPSLEEIQKKLEAAEERRKYQEAELLKHLAE----KREHEREVIAIEENNNFKMAKNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE----------------------------------------------------------------------------------------------- |
4 | 5zakA1 | 0.12 | 0.12 | 4.28 | 1.11 | PROSPECTOR2 | | IRGDFSRNGKRTLKVGEYSNLEVNASWTKERWNQEFTKHQKNGYLSLSHPYREIMKLCENCPSCPRILILNGKCDPEELILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLY--ERLLMELEEALNFINDCNISRDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPFTNILCYTAVVLNRLIKEAGKQDPELAYGIGKNQPRNKQMEAEFRKQEEVDTDKIKSFEEDLKSV |
5 | 5yfpB | 0.06 | 0.05 | 2.40 | 1.16 | SPARKS-K | | EKFLDGTYQNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVEEFITSVSQNLISFF----TSSQSSLPSSLKD-------STGD----ITRSNKDSGSPLDYGF-IPPNCNGLSCLRYLPKIVEPILKFSTELAQLNITTNGITICRNTLSTIINRCVGAISSTKLRDISNFY--QLENWQVYETVTFSSKSQDSSKNLTFEYGVTTSFQEVSIKTTRDLLFAYEKLPIINGISVVKQLLTGIEIQQIISMVLEAILKNAAKDKDNPRNSHTILYFRECAFPNILQYFDDA |
6 | 2majA | 0.20 | 0.05 | 1.62 | 0.71 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------SHMASSRQKYAEEELEQVREALRKAEKELESPEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKR---------------------------------------------------------------------------------------------------------------- |
7 | 4f61I | 0.12 | 0.05 | 1.67 | 0.49 | HHpred | | -------------------------------------------------------------------IELNKA--TSGQSWEVILKPPSFD----GVPEF---------NRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQRAIEENNNQKMES--NKENREAHFAAMLERLQEKDKHAEEVRQRAIEE------------------------------------------------------------------------------------------------ |
8 | 6aayA1 | 0.13 | 0.12 | 4.22 | 0.80 | MUSTER | | -NIYYNPFKPQVFRELGKRLKGKEYTSENFFDAIFKENI------SLVEYERYVKLLSDYF-PARLLDKKEVPIKERKENFKKNF----KGIIKEHGEVEITD-EIFGVLDELKSTVLTVKKKKVKTDKTKEILKKSIE------KQLDILCQKKLEYLRDTARKIEEKRRNQRERGEKELVAPFKYSDKRDDLIAAIYNDAFDVYIDKKKDSLKESSKAKYNTKSDPQQEEGDLKIPTKQEIHAFKSKIAGFKATVIDEATVSEATVSHGKNSICFATHSHL-AYKKLKRKVRTA |
9 | 3kbtA | 0.12 | 0.03 | 1.20 | 0.33 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------KRHLRQQRAVEDYGRNIKQLASRAQGLLSAG---------PEGEQIIRLQGQVKHYAGLKDV----------AEERKRKLENMYHLFQLKRETDDLEQWISEKEL-------------------------------------------- |
10 | 1sa1E | 0.16 | 0.07 | 2.24 | 0.96 | HHsearch-2 | | ----------------------------------------------------------MEVIEL------NKCT--SGQSFEVILKPPSFD----GVPEFN-----ASLPRRPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAI--EENNNFKMASNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE----------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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