>PF15394 (537 residues) SFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQL LHIIYQRVDKAVGLAEAALGLARANNELLKRLQEEMGELRQGKVSTPDEDGESRAHSSPP EEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRDM RLPGCTLAASEGAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATSETGPE NGTKLPPPRPEDMLNATAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRKR DLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKELK GACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWKD VTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRLP SAEAQLLPPELYNPNFQEEEDEGGDENAPVSPSFDQPHKTCCPDLNSFIEIKVEKDE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQLLHIIYQRVDKAVGLAEAALGLARANNELLKRLQEEMGELRQGKVSTPDEDGESRAHSSPPEEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRDMRLPGCTLAASEGAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATSETGPENGTKLPPPRPEDMLNATAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWKDVTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRLPSAEAQLLPPELYNPNFQEEEDEGGDENAPVSPSFDQPHKTCCPDLNSFIEIKVEKDE | |||||||||||||||||||
1 | 5mqfM | 0.09 | 0.09 | 3.30 | 1.43 | Neff-PPAS | -----AFVFMHKMPRLWLDYCQFLMDQGRVTHTRRRALPITQHSRIWPLYLRFLRLPETAVRGYRRFLKLSPESAEEYIEYLKSRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFDQLGKLWCSLADYYIRSGAIRTVMTVFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPRQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRERARDLFEQALDGCPPKYAKTLYLLYAQLEEVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARASFCSQICDPRTTGAFWQTWKDFEVRHGNEDT | |||||||||||||
2 | 5xn7A | 0.10 | 0.09 | 3.22 | 1.27 | PROSPECTOR2 | NLSTILLDNPQQKSIERFI-----LANFDNFEQPDELFLVDNKVLSHHDGRTRILSVTELLDASYQQVIDALTEYHASTAYELTSVEKLLNLRKQVEGYVLGHPDSGRVQAN---------------------------------ALLNQVNSRLEAVSVLVVSEQSIKAHDSFSHLYDQNLKESKHLYLDGNGTKGKGNLANIDKLGGSDAVLEKVKAAVSHEYGQVVADTIFAGLSANDLAKDGKGIDIAGLNKVHQAIEQHSPVSATYIWKPSDHSALGHAALQIGQGRTQLEGQAAADFNKQSKSSNIRNIFNDLKLRGLNDGETKLKRFVEKLNASEGYASVLLGNPDLASTGIPAHVFQPFVDQWND-----TSYDDVANRFAEELQKQAQAVEKRIDNVVRLFAERALEEIEAFKASQADEEGLDVAAQAEWNRLSNQLLTKNASSTVAKVLKAGGADKLIGHTWRPKFGVWTPTELFNFGQALQEAQLEIA-----------------------------------AKK | |||||||||||||
3 | 4btgA | 0.12 | 0.11 | 3.98 | 0.93 | SPARKS-K | LKVKDLNGSARGLTQAFAIGESVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVARLFFQYAQASVDELVNQFTEYHQSTACNPEIWRKLTAYI-----------------TGSSNRAIKADAVGKVPPTAI-----LEQLRTLAPSEHELFHHITTDFVCHVLSP--LGFIL-------PDAAY-----VYRVGRTA-TYPNFYALVDCVRASDLRR----MLTALSSVDSKMLQATFKAK-GALAPALISQHLANAATTAFERSRGNFDAVLTILGRLWSPSTPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIEELSSPWFIEAMSEVINETTSYIGQTSAIDHMGQPSHVVVITAFTPVKLANNSNQRFPGISDRMSATLVKNRTAVFPSVVERDYALDRDPMVAIAALRTG-IVDES---LEARASNDLKRSMFNYYAAVMHYAVAHNGVAAEQGSVWNVRTELRIPVGYNAITPEPLEAIAYNKPIQPSEVLQAKVLDTEFAYEDAYSVTIRNKYTAEVKEFE | |||||||||||||
4 | 5a9qA | 0.11 | 0.10 | 3.47 | 0.89 | FFAS-3D | GHSWALSAIDTPLNKDH-------IPITDSPVVVQQHMLPPKKFVLLSAQGSLMLRPVDQLRHLLVEIEREDQACATCLILACSDREVSAWATRAFFRYGGEAQMRFTTLPVYSGKDASLVVESSVPCQLLESVLAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTLQKELQEQLKITTFKDLVIRDTGALIASLINCYIRDNAAVDGISCDAISRQVRESLKEYQKISNQVDLSNVCAQYRQVRYEGVVELSLTAAEKKDPQG--------LGLHFYKHGEPEEDVGLQAFQERLKCITDTLQELVEAGHHFEQMLKLSQRL---FSIALYNWLIQVLADKLLQVASPFLEPHLVRMLLWRYYEKNRSFSNAARVLSRLADMHTEISLQQRLEYIARAILSAEFLHELEEKMQLQIQETLQRQYSHHSSV------------QDAVSQLDSEL-------MDITKLYGEFADPFKLAECKLAIIHCAGYSDPI--------------------------------------- | |||||||||||||
5 | 4wrtB2 | 0.19 | 0.06 | 1.87 | 0.41 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSFGVAGVNES---AD-MAIGMTIIKNNMINNGMIQLFIADYRYTYKCHVRMKIIKELWENTKGNIYNLRNLHIPEIVLKYNLM-DPEYLHPQNPFVGHLSI-E-GIKEAD----------------------------ITKMDYDAVSGTHSWRTKRNRSRNMILEEQCYAKCCNLFEACFNSASYRKPVGQHSMLEAM---------------------------------------------------- | |||||||||||||
6 | 5xn7A | 0.16 | 0.15 | 4.88 | 0.82 | MUSTER | GFEVRILLDNPQQKSIERFILANFDNFEQPDELFLVDNKVLSHHDGRT-RILARKSVTELLDAAHESYQQVIDALTEYHASTAEHADYELTSVEKLLNLRKQVEGYVLGHPDSGR--VQANALLNQVNSRLEAVSVLVVSEQSIKAHDS----FSHLYDQLDNANLKESKHLYLDGNGDFVTKGKGNLA---------NIDKLGGSDAVLEKVKAAVSHEYGQVVADTIFAGLSANDLAKDGKGIDIAGLNKVHQAIEQHSPVSATYKPSDHSALGHAA-LQIGQGRTQLEGQAAADFNKQNYVLGSKSSNIRNIFNDLKLRWSDSQPAHQGLNDGETKLKRFVEKLNASNPDLASTGIPAHVFQPFVDQWNDYDDVANRF--AEELQKQAQASGDPALVEKRIDNVVRLFAERALEEIEAFKASQADEGLDVAAQAEWLSNDPDARYQLLTKNASSTVAKVLKAGGADKLIG--HTWRPKFGV-WTPTELFN--FGQALQEAQLEIAAKK-------------------------- | |||||||||||||
7 | 4xrkA | 0.14 | 0.07 | 2.36 | 0.80 | CNFpred | --------------------------------------------------------LEPLIRSLFNGLMNSPKMAASCCWAL---MNIAERFAGEP-----------------------GAAQNPLTPHFNQSVTNLLTVTAPMNGDSTVRTAAYEVLSVFV----------------------------------QNAANDSLS---AVASLSTV------------------------------------ILQRLEETLPLQQQVVSVEDKLILEDMQTS-----------------LCTVLQATVQRLDKEIAP-------------QGDRIMQVLLQILSTCGGKSSVPEGVFAAISALANAMEEEFAKYMEAFFLYNALGNQEEPSLCSMAIGLVSD---VTRSLGERSQPYCDNFMNYLLGNLRSTTLANQFKPAI-----LQCFGDIASAIG------------------------------------------------------------------------------ | |||||||||||||
8 | 2pffB | 0.19 | 0.14 | 4.55 | 0.77 | HHsearch-2 | ------------------------------------MDAYSTRPLTLSH-----GSLEHVL---L------VPTAS---------FFIASQLQEQFN----KILPEPTEGF---AADDEPTTPAELVGKFLG--YVSSLVEPSKVGQFDQVLNEGNDIHALAAKLQENDTLVKTK----------------------ELIKNYITARIMAKRP----FDKKSNSALFRAV----GEGNAQLVAIFGGQGNTDDYFEE-LRDLYQTY-----HVLVGDLIKFSAETLSELI--------RTTLDAEKVFLNILEWLENPS-NTPDKDYLLSIPISCPLIGVIQLAHYVVTALLGFTPGELKGATTAVAIAETDSWESFFVSV----RKAITVLGVRCYEAYPNTS--------LPPSILEDSLENN-----EGVPSPMLSISNLTQEQVQDVNKTNSHLPAGKQNGAKNLVVSGPP-------------QSLYGLNLTLRKAGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVKNN | |||||||||||||
9 | 1ciiA | 0.13 | 0.12 | 4.23 | 1.17 | Neff-PPAS | --AVDIYVNPPRGTPPAW--------SSFGNKTIWGGNEWVDDSPTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNA-----------------------DAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKFPGRSSTNDSIVVSGDPDNRANLNYLLSHSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAWDKLRQRLLDARNKITSAESAVNSARNNLSARKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKAKDAINFTTEFLKSVSEKYGAKAEQLAREMAGQA--KGKKIRNVEEALKTYEKYRADINKKINAKDRAAIAAALESVKLSDISSNLNRFSRGLGYAGKFTS----------LADWITEFGKAVRTEN | |||||||||||||
10 | 5xefA | 0.14 | 0.03 | 1.02 | 0.30 | HHsearch | ----------------------------------------PDQAWQRYQNDI-TSNPIKNTIFIYERCIIEFRKLEELLKLQDGD-ELLEKLERIFEELKLQLNPD--ITKD---------LYDSLFGL-YDWISIIQTKVTREVKDIDAIVQVLQDLIDGYRGALENE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |