>PF15392 (352 residues) PLQMTGLTDIADVIDDLITKDGVSSEELGLTEQQARNISRTQHSSGRCPQRTEKERREIQ IWMKRKRKERMAEYLNQLAEKRGQEHNPFCSRSNPFYMTSREIRLRQKMKHEKDRLLLSD HYSRRISQAYSLMNELLFESVQLPATAQKPLPTKPRTAEISRWQRSLSPRGENRHGHNFP INRPGKVRNTSKPSYTQKGKPLGQAQGSPWPRGTATFTIQKKAGGAKMAVRKAAQSPVTF RKGSHAPCHSLQHTKNHGSSGLAPQTKRVCIEYEREETVVSPWILPSDIHKILHESHSSL LQDLSQTKEEPEPPFEVGGMDSMSESTGSILSKLDWNAIEDMVASVEDKSLS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PLQMTGLTDIADVIDDLITKDGVSSEELGLTEQQARNISRTQHSSGRCPQRTEKERREIQIWMKRKRKERMAEYLNQLAEKRGQEHNPFCSRSNPFYMTSREIRLRQKMKHEKDRLLLSDHYSRRISQAYSLMNELLFESVQLPATAQKPLPTKPRTAEISRWQRSLSPRGENRHGHNFPINRPGKVRNTSKPSYTQKGKPLGQAQGSPWPRGTATFTIQKKAGGAKMAVRKAAQSPVTFRKGSHAPCHSLQHTKNHGSSGLAPQTKRVCIEYEREETVVSPWILPSDIHKILHESHSSLLQDLSQTKEEPEPPFEVGGMDSMSESTGSILSKLDWNAIEDMVASVEDKSLS | |||||||||||||||||||
1 | 5yfpA | 0.10 | 0.10 | 3.54 | 1.22 | SPARKS-K | DELLKTVSLDEISLNQLL-ECPIREKNLPWMENQLNLLLKAFQAIGSDEISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDI-----SHDQM-----IRILTTLLIFSPLILFCKEYQAIVENWNVSIQPVYMELWTKKISQLQGIDTNDEKMNELSLSQLLNEWDTFRKERKTNDIN-----PVFKNSFSLLTECLQTMRQECIVYQNFVEVFFHISS------KHNFEEYIKHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVAEPTVAPFYLENEIKSLESSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGIL--DLPVGLKNSEDLFQF | |||||||||||||
2 | 1st6A | 0.11 | 0.11 | 3.90 | 1.03 | MUSTER | VLQLTSWDEDAWASKDTEA----MKRALALIDSKMNQAKGWRDPNAPPGDAGEQAIRQILDEAGKAGEKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQDLLAKCDRVDQLAAQADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFSDTTTP | |||||||||||||
3 | 2tmaA | 0.10 | 0.08 | 3.03 | 1.69 | Neff-PPAS | -------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDEL-DKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAED-ADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----------------------------------------------------- | |||||||||||||
4 | 5yfpB | 0.08 | 0.07 | 2.96 | 1.20 | SPARKS-K | IELNKFYFNLPKSLKRCLTNNNEFIIE--YSKGLTLRRRFNQSSDASQSLQIENLLVTYKDLIWNSLIETILSLFSKLLNLENFI------KNTTSSSNENPILRWMSIKMNGFQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNT-ISGTSYLNLNCQPSSQGLTDSPTIIEMWLLKYINDLWKICDQFIEFWEHIEKFLDGT---YQNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVEEFITSVSQNLISFFTSSQSSLPSSLGSPLDYGFIPPNCNGLSCLRYLPVEPILKFSTELAQLNIT | |||||||||||||
5 | 6gylW | 0.12 | 0.05 | 1.69 | 0.71 | FFAS-3D | PIDDIVLKFVVRVLDAILFHSVLAEDDLSINKTELGPLIKQREYPPNSKSVERVKYPHAIDAIKWKVHQVVQRLKDDLDK--NSEPNGYMCPICLTKYTQLEAVQGKKNKEKQDKL---NRLMDQIQPIIDSLKKI--DDSRI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5wqlC1 | 0.16 | 0.07 | 2.36 | 0.31 | HHpred | ------HATVSERVTSRFTRSHYRQFDLD-----------------------Q----AFS-------AKIFDRYLNLLD-------------YSHNVLLASDVEQFAKKKTELGDELRYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLD----------------------------------------------------RSKAPWPKNEAE---------LNALWDSKVKFDELSLKL----------TGK----------------------------TDKEIRETLTRRYKFAIRRLAQT--------------------------------------------- | |||||||||||||
7 | 6etxG | 0.09 | 0.09 | 3.52 | 1.03 | MUSTER | PIQ--TMAELWALLHFIMPKSAIDENQLSRLHMILKPFKDVENELSDKIQLTSRQKLLYQALKNLVMQFRKVCNHPELFERQET-WSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKELYALDVLLTRLKSQG-S | |||||||||||||
8 | 1dg3A | 0.16 | 0.06 | 1.89 | 0.51 | CNFpred | -------QKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQ--------ERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6gmhQ | 0.13 | 0.12 | 4.35 | 0.59 | HHsearch-2 | VLKAPNNYETMKILGSLYAASEQYPDDVE----AWIELAQILEQ--TDIQGALSAGTATRILQLGNLGEAKKYFLASLDRAKAAEHDEHYY--NAISVTSYNLARLYEAMCEFHENILREHDKGNFYEASDWFKEALQINQDHPDAWSIHLAKQEGPGQKKFERILKQPTQSDTYSMLALLHQPTRDREKEKRHQDRALAIYKQAKN-LYANGIGAVLAHKYFREARAQVREATDISVWLNLAKQYISMYENCLRKFYNTEKCGK-LQECKQTLLKARHVAPSDTVFNVALVLQRLATSVLKDVLNAVKRYFSYLKLALAATEARQCSDLLSQAQYHVARARKQDEEERELR | |||||||||||||
10 | 3tnfB | 0.08 | 0.07 | 2.94 | 1.53 | Neff-PPAS | ---LDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFEKLLTDSEELSLSEINEKMEAFSKDSEKLTQLMEKH--------KGDEKTVQSLQREHHDIKAKLANLQVLHDAHT---------GKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKHYVIGKDQQLFNLGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERVEETKQQLEDNGKEKIEIA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |