Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MGPRNPSPDPLSESESEEEGNANYLNESSGQEWDSSEGEDPVVPNVSPLESLAWQVKCLLKYSTTWKPLHPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPRLEPIPEWPPLASCGVPPFQKPLTNASRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCGWLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL |
1 | 5yfpE | 0.09 | 0.08 | 3.18 | 0.70 | SPARKS-K | | YDKEINKRVLLD--------KYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCVVESTARVMIPNKAHLYILEILKIMFLGIVDSYM--EIALEVAYWKICKVDINKTAGVVNLNFLKFSIFLPLLNNSPEIKAQIIE---MTNSQIQKMEILINIILQETAILCKQQDTLPAIEIVNILNLIFEQSSKF--LKGKNLQTFLTLIGEELYGLLL |
2 | 5xtcd | 0.14 | 0.10 | 3.33 | 0.58 | FFAS-3D | | ------------------------------DSWDKDVYPEP--PRRTPVQPNPIVYMMKAFDLIV------------------DRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQEIINIMQDRLKACQQREGQNYQQN------------CIKEVEQFTQVARYQDLGAYSSARKLAKQRQRMLQE-- |
3 | 6j67A | 0.16 | 0.11 | 3.70 | 0.30 | HHpred | | ------------------------ALRAFRGSRYGD----------------FRQIRDIMQALLV-RPLGKE--HTV------SRLLRVMQCL-SRIEEGENLDCSFDMEAELTPLESAI-NVLEAVVESSRKLVKEAAVKNKEFEKASKILKK-------------HMSKDPTTQKLRNDLLNIIREKNLAHPVIQNFSYETFQQKMLRFLESHL |
4 | 4uniA1 | 0.16 | 0.14 | 4.75 | 0.56 | MUSTER | | -HRAHRWPQPLPGNDRKIWFGADY----NPDQWPEDVDED--------IRLMQAGVNIVSLAIFSWANIETSDGNFEFDWLDR---IDKLYKAGIAVDLASASPPMTSAHPEVLRRDEQGHVI---WPGARQHWRPTSPTFRTYALRLCREMAEHYKDNPAIVSW--HVYGCHNYFDYCCAERDVLSEVTPNIPLNFTLDYDDWAHEVD----VS- |
5 | 5wbuA | 0.11 | 0.07 | 2.65 | 0.59 | CNFpred | | ------------------------------------------------LQDTLRVLTLWFDYGH-VKAIQIDTWLQVIPQLIA-LVGRLIHQLLTDIGRY-------HPQALIYPLTVASKS--------TTARHNAANKILKNMCEHSNTLVQQAMM---VSEELI-----RVAILWHEMWHEGLEEASRLY---GERNVKGMFEVLEPLHAMME |
6 | 1vt4I3 | 0.14 | 0.09 | 3.17 | 0.66 | HHsearch-2 | | -------EYALHRSIVDHYNIPKTF--------D---SDDLIPPYLD-----QYFYSHIGHHLK-----N----IEHPERMTLFRMVFLDFR--FLEQKIRH---------DSTAWNASG------------------SILN-TLQQLKFYKDPKYERL--VNAILDFLPKIEENLICSKY-TDLLRIAL----MA--EDEAIFEEAHKQVQRGGG |
7 | 3tdvA2 | 0.08 | 0.07 | 2.93 | 0.64 | Neff-PPAS | | ---QILGEDGMAVPDDAKDRLALQLAEFMNEAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPL--LDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD-----PDYDYVYLLEDCGELFTRQVMAYRGE-----VDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLEEDKANNF |
8 | 4cvdA | 0.29 | 0.05 | 1.41 | 0.37 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTTVANEVIQGSLANAGYDPQAVQDKVNEILNAR- |
9 | 5h6iA | 0.11 | 0.10 | 3.64 | 0.51 | SP3 | | -----------VNSNNQAQQMAQKLDQDSIQNIKDNVQGTDYEKPVNEAITSVEKLKTSLRANSE-TVYDLNSIGSRVEAL-----TDVIEAITFSTQHLAN-----KVSQANIDMGFGLVIRILDPFASVDSIKAQVNDVKALEQKVLIYTKSKLDKEINTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQ-LNPNVTVQQVDQEIVTLQAALQ |
10 | 2m64A | 0.13 | 0.12 | 4.02 | 0.82 | PROSPECTOR2 | | PAGKATTEAGVQPADKYRTFVATFGAASNKAFAEGLSGEPKGAAESSSKAALTSKLDAAYKLA--------------YKTAEGATPEAKYDAYVATLSEALRIIAGTLEVHAVKPAAEEVKVIPAGELQVIEKVDAAFKVAATAFTVFEAAFNDAIKASTG--------GAYESYKFIPALEAAVKQAYAATVATAPEVKYTVFETALKKAITAPA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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