Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | KPGKWCAVHVQIAWQIYHHQQKMKQMHMDPHKLDMNGKLDLFSRPPAPGVFPGFPYPHDLARPLFSSTASGHPAASPYGPSPHHTAFLPPSHLADPFSRSSTFGGLSNLSSSAFGGLGNPALGANSVFGPKEGPGLPGLSSPHHDTWNRLHRTPPSFPTPPQWPKSADAERSSSANSHEREREREKEKEREREKRDSSVGKEEKDKDRDSLDRNRHSNRSSP |
1 | 5aftV | 0.10 | 0.07 | 2.51 | 1.28 | SPARKS-K | | -------------------------------------------------SGNKVSRQSVLCGSQNIVLNGKMNDCIIRGDLANHCVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRCVLKDCCKILDNTVLPPPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLTQV-------------------- |
2 | 6etxG | 0.12 | 0.12 | 4.16 | 1.16 | MUSTER | | RVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGG |
3 | 6e5p2 | 0.10 | 0.08 | 2.99 | 1.28 | Neff-PPAS | | ---------------------------VESGGGLVKAGGGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP------------------AVLQSSGLYSLSSVVTVPSSSLGTQT |
4 | 6gmhQ | 0.21 | 0.17 | 5.28 | 1.10 | HHsearch | | ATADISDVWLNLAHIYVEQKQYISQMYENCRKFYKHQNTEVVL---------------YLARALFKC-GK-------LQEC--KQTLLK-ARHVAPSDTVLMF----NV-----------ALVATSVLKDKEVLAVKELELA-HRYFSYLSK----LALAATEAAQYHVARARKQDEEEREAKQEQEKELLRQKLLKEQKRLREEEQKKLLEQ-RAQYVFT- |
5 | 4k0mC | 0.09 | 0.08 | 2.92 | 1.16 | PROSPECTOR2 | | KVYT---------------IDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------AAAAAAAAAAAAAAAAAAAAAAAAAAA |
6 | 3j2k71 | 0.13 | 0.11 | 3.90 | 1.09 | SPARKS-K | | ------------------------PKPKSVVAPPGAPKKEHVNV----VFIGHVDAGYLTGMVDKRTLEKYEREAKEKNRETWYLSWADKGKTVEVGRAYFETEKKHFTILDAPGHGASQADLAVLVISARKGEFETGFEKGQTREHAMLAKTAGVKHLIVLINK---MDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKEQSDFCIPYLDNLPNFNRSVD |
7 | 6fmlG | 0.09 | 0.09 | 3.55 | 1.02 | MUSTER | | GYSTRSLVEYRLPRLIWCDLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPVTLYPPRALLPAPDHDKQRFT |
8 | 1ciiA2 | 0.07 | 0.07 | 2.91 | 1.26 | Neff-PPAS | | --AVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKN-TPDGKTIVSPEKFPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQD---- |
9 | 6gmhQ | 0.14 | 0.12 | 3.98 | 1.10 | HHsearch | | AKQEWTYSMLALGWLQLHHQDRALVLRNDAKNLYFREARDVF-----------------------AQVREATAD--------ISDVWLNLAHIQKKFYKHQNTEVVLYLARALF-KCGKLQ-ECKQTLL-K---ARHVAPSDT-VLMFNVKSNLKEVLNAVSYLALAATERSQAQYHVARARKEEELRAKQEQEKELLRQKLL-KEQEEKRLREKEEQKKL- |
10 | 5gaoE | 0.07 | 0.07 | 2.95 | 1.11 | PROSPECTOR2 | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEAYKKLSQKFHGTKSNKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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