Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | HSLTLREALEVYKPQFISRSQERLRKLESMAQQRKAQGCETPRKKPSPLPLRPTKKKQYTIPHPLSDNLFKPKERCISEKEMHMRSKRIYNNLPEVKKKKEEQKKRVILQSNRLRVEVFKKQLLDQILQR |
1 | 5cwcA2 | 0.17 | 0.12 | 4.04 | 1.13 | SPARKS-K | | TSSEVLELAIRLIKECVENAQREISEACRAAAEAFKRVAEAAKRAG------------------------------ITS------SETLKRAIEEIRKRVEEAQREDISEACRQAAEEFRKKAEELKRR- |
2 | 5t4oI | 0.09 | 0.08 | 3.28 | 1.16 | Neff-PPAS | | -VLFAMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANS |
3 | 4tqlA1 | 0.15 | 0.12 | 4.13 | 1.03 | SPARKS-K | | ELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEK-------------------------LLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKKIAEDLIKK |
4 | 2gzkA | 0.14 | 0.13 | 4.46 | 0.81 | FFAS-3D | | -RMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRKGETKKKFKDPNAPKRPPSAFFKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-------- |
5 | 2zd7A | 0.12 | 0.05 | 1.62 | 0.21 | HHpred | | -------------------------------------------------------------------------------QENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDA--YID- |
6 | 5nnvA | 0.09 | 0.09 | 3.49 | 0.92 | MUSTER | | QLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALR |
7 | 1bz4A | 0.11 | 0.09 | 3.30 | 0.55 | CNFpred | | -SEQVQEELLSSTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQA----------------------AQARLGADMEDVCGRLVQYRGEVQAMLGQ--TEELRVRLASHLRKLRKRLLRD |
8 | 5x89A3 | 0.16 | 0.04 | 1.28 | 0.39 | HHsearch-2 | | EPMSVEELLSFFEPGFRAGYV----V---YRDLTE---------------------RGY----------------------------------------------------------------------- |
9 | 2otoB | 0.05 | 0.05 | 2.45 | 1.14 | Neff-PPAS | | NNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRAN |
10 | 3b1sA | 0.26 | 0.06 | 1.90 | 0.30 | HHsearch | | ---------------------------------------------------------------------------------------------PEVKSRIKARMRELAK--SRMMAEVPKATVV---IT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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