>PF15308 (672 residues) KMVISVHQSPQDQESMAGKEISFVRQESFTKDKSSSAVPQNKLPHISSHPLLKDLEAVRS TRMDFGQDTHLLLKDTETALAVLEAKLLGQSQKLEPSEAAGQLEDSLSGDSDVDTASTVS LVSGKNVPASAPKRKAVASLQKEKSSSSPSIQDQCGQPSARDRLTEKRKANVPEAPRCVE ATKRFQMKRSAGTRGSLDFTDDERSSSLPYLPVPDAVVSDHEHSVPRPAPRRKPFTQAAK EDHSKTTANVQKIQQVLTRSNSLSTPRPTRASKLRRARLGDASDNECVDTEKTASNPEAA APGSKQSTETKKLSRLDILAMPRKRAGSFTVPSDSETAQSRTGFSGRSVESYRKATVSEI RAAARKTAAAASAKQPFSRTRSSSVKYSPSSTSRRRPQGSDYTSTSEEEYGSNHSSPKHK RSHTSTATQTPRIRGSGLGKQKHNGRETDDDEDFDDHPDPYNFMAQTAEIAEIARLSQTL VKDVAILAREIHDVAGDGDSQSSSGTGPSTSLSSVPNTPASTISAREELVQHIPEASLNY QKVPPGSVELKSFDQNMNDNREDDLSKKTRTRNREEVIFDNLMLNPVSQLSHTIRENTEN LAEKMKILFQNSERTWEEMEAKINSENEVPILKTSNKEISSILKELRRVQKQLEVINAII DPTGNLDVVASN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KMVISVHQSPQDQESMAGKEISFVRQESFTKDKSSSAVPQNKLPHISSHPLLKDLEAVRSTRMDFGQDTHLLLKDTETALAVLEAKLLGQSQKLEPSEAAGQLEDSLSGDSDVDTASTVSLVSGKNVPASAPKRKAVASLQKEKSSSSPSIQDQCGQPSARDRLTEKRKANVPEAPRCVEATKRFQMKRSAGTRGSLDFTDDERSSSLPYLPVPDAVVSDHEHSVPRPAPRRKPFTQAAKEDHSKTTANVQKIQQVLTRSNSLSTPRPTRASKLRRARLGDASDNECVDTEKTASNPEAAAPGSKQSTETKKLSRLDILAMPRKRAGSFTVPSDSETAQSRTGFSGRSVESYRKATVSEIRAAARKTAAAASAKQPFSRTRSSSVKYSPSSTSRRRPQGSDYTSTSEEEYGSNHSSPKHKRSHTSTATQTPRIRGSGLGKQKHNGRETDDDEDFDDHPDPYNFMAQTAEIAEIARLSQTLVKDVAILAREIHDVAGDGDSQSSSGTGPSTSLSSVPNTPASTISAREELVQHIPEASLNYQKVPPGSVELKSFDQNMNDNREDDLSKKTRTRNREEVIFDNLMLNPVSQLSHTIRENTENLAEKMKILFQNSERTWEEMEAKINSENEVPILKTSNKEISSILKELRRVQKQLEVINAIIDPTGNLDVVASN | |||||||||||||||||||
1 | 4btgA | 0.10 | 0.09 | 3.27 | 1.68 | SPARKS-K | FAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWENIDPVMYARLGGALSVDETEYHQSTACNPEVPPTAILEQLRHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNVDCVRASDLLSSVDSKMLQATFKAKGAL----APALISQHLANAATTAFERS---------RGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFRGR-------AEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSY-----IGQTSAID----------------------HMGQPSHVVVYE------DWQFAKEITAFTPVKL---ANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSKNRTAVYEAVSQRGT------------------VNSNGAEMTLGFPSVVERDYALDRDVAIAALRTGIVDESLEAR------------------ASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEQGVAAEQNVRTELRIPVGYNAIEGEPLEAIPSEVLQAKVLDHEASTEFAYEDAYSVTIRNKRYTQRRERVR--ILKPTVA-HAIIQMWYSWFVEDDRTLAAARRTSRDDAQNAVTLLRKIEMIGTTGIGASVHLAQSRIVDQMAGRRHRIRIWAGLAQMMGLLEALTKV | |||||||||||||
2 | 1zlgA | 0.09 | 0.08 | 2.94 | 1.52 | MUSTER | AAGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKAS---GFAAACVESCEVDNECSGVKKGHTCQVPKTLYKGVPLKPRKELRFTELQSSSKFNISIEPVRRWNYGIHPSEDDATHWQTVAQTTDERVRPSRWRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKL-------QPDCELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKKKTEDPTVNRFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKQPIRPKSHSKAEAVFFTTPPCSALK------------------------------GKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFS--KMAKANLEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLR------------PSTL----RLEVQVLTPGGEGPATIKTFRTPELPPSSAHRSHLKHRH--------------KPSPERYG--KPIPNP | |||||||||||||
3 | 2cseB | 0.11 | 0.10 | 3.58 | 3.57 | Neff-PPAS | --------NVTGDGNVFKPSAETSSTAVPSLSLSPGMLNPGGVPWIAIGDETSVTSPGALRRMTSKDIDEPLVVVTEHAIANFTKAEMALEFNREFLDKLRVLSVSPKYSDLLTYVDCYVGVSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTN---------------VPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKEAAVALAKRNGGIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADYNVRTLKIDEATWL---RMIPKTMGTLFQIQVTDNTGTNWHFNLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEPEQLNKTDPEMLLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVTVKGAVVSEVVAELIGSYTPESLNASLPNDAARCMIDRASKIAEAIKIDDDAGPDEYSPNSVPIQGQLAISQLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTIITQAAPVLSDK----------------NNWIALAQGVKTSLRTKSLSAGVKTAVSKLSSSESIQNW---------TQGFLDKVSTH | |||||||||||||
4 | 4btgA | 0.10 | 0.10 | 3.62 | 1.60 | PROSPECTOR2 | GFNLKVKAFAIGELKNQLSVGALQLPLQFTRTFSASMTSLWEVGKGNIDPVMYARLFFQYAQAGGALSVDELVNQFTEYHQSTACKLTAYITGSSNRAIKADAVGKVPPTAILETTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFK------AKGALAPAAATTAFERSRGNFDANAVVSSVSPSTPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYED-----WQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVARTGIVDESLEARAAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIVLDLANHTTSIH-IWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAE----------KLAIDGRRMQNAVTLLRKIEMIGTTGIRIVDQMAGRGLIDDSSDLHVGINRHRIRIWAGLAVLQSEAEALTKVLGDSNALG--MVV | |||||||||||||
5 | 5yfpE | 0.08 | 0.07 | 2.89 | 1.58 | SPARKS-K | -------------------------------------------SLYELDPKWKKLLKTDNFLGGLTV------NEFVQELS---KDHRNDVLIDANTKNLPTNEKDQDIWKQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHTNVTQVVSPLGDKLETAIKKKQNYIQLIRRYNDFYSMGKSDIVEQLRLSKNWKLNL-KSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNAIILNIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQNLINDVETEEKATHVIQLFIQRQKIEPRRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCHYLYDRSKY-FGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSL-NDVDSMLKCVVESLYILEILKIMFLGIDSYMEIALEVAYWKICKVDINKTAGVVNLNFLKFMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQKMEILINIILQETI-TVISTKFSAILCKQKLPAIEIVNILNLIFEQKGKNLQTFLTLIGEESHYSHFQVNSIGGVVVTKDIIGYQTAIELANLFTVQPELLESLTKE | |||||||||||||
6 | 3cnfB | 0.06 | 0.06 | 2.53 | 0.96 | FFAS-3D | --------ASEADDRIVGPTVNLFKYGAAVVDTATGIDLTKGIPLVQDLLVPIGVTAGAEQSAEYVSGLLMVLDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQ--------FHGPNQGALRPELAFD-HDHIIRCLMLAAANYPRLEGIIVQINTGYVASANVIRPVSEKRYF-PENLEQNQSAARARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILFPT--------------------EFNRIKGDIQNVLLLFFSRWYPVEYGIFVQRGATYTINAAGEFEFSGRNEK-----WDQALYLSEHFPALFSDVPLAGANTIIAIMR-LFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTVTNEFASRFRTIVATLVVNERAVQDDMQK------ATRSCTKQWLRHLETQFDNIAVAHTDH---LSVVYATMSNFNNFATHVAVVLYQSGVINGPASTYLRENEVLVVQMNNNRYHESVLEIADIQADFIQTSDAVRERIAQITDVDSTDYGKLTLRFLGTIDIEAFRWSNPRIARRFNGVRIMYLTDDDPDPDDVPEGYVAVQYAH | |||||||||||||
7 | 1vt4I | 0.16 | 0.04 | 1.48 | 0.51 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQDMPKSIL-SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEQKFVE-----------EVLRINYKFLMSPIKTEQRQPSMMT------RMYIEQRVFAKYNVSRL-QPYLKLRQARPAKNVLIDGVLGSGKTWVALDVCLSYPETVLEMKLLYQID-PNWT-------SRSD--HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLNVNAKAWN-- | |||||||||||||
8 | 3chnS | 0.09 | 0.07 | 2.80 | 1.48 | MUSTER | SPIFGPEEVNSVEGNSYYPPTSVNRHTRKYWCRQGARGGCITL--ISSEGYVSSKYAGRANLTNFPENGTFVV------------NIAQLSQDDSGR-GLGINSRGLSFDVSLE----------SQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKS----------YKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVV-------------TGLRKEDAGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDANGDTLWRTTVEEGEPNLKVPGNVTAVLGETLKVP-------------------HFPCKFSSYEKYWCKCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRAVKQGHFYGETAAEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQDPR------------------------------------------------------------------------- | |||||||||||||
9 | 4jeuB | 0.17 | 0.04 | 1.47 | 0.65 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFFEQVEEIRGFIDKIAENVEEVKRKHSAIL------------------ASPNPDEKTKEELEELMSDIKKTAN------KVRSKLKSIEQSIEQEEGLNRSSADL--RIRKTQHSTL-SRKFVEVMSEYNATQSDYRERCKGRIQR--TTSEELEDMLESGNPAIFA-MDSSISKQALSEIETRHSEIIKLENSIREHDMFMDMAML | |||||||||||||
10 | 2pffB | 0.19 | 0.13 | 4.15 | 0.74 | HHsearch-2 | ------------------------------------------MDAYSTRPLTL-----------SHSLEHVLLVPT--ASFFIASQLQEQFNKI----LPEPTEG-FAADDEPTTPA---ELV---------GK-----FLGYVSSLVEPSKQFDQVLNL--CLTEFENCYLEGND-IHAAAKLLQE-------------------------NDTTLVKTKELIKARIMA-KRPFDKLFRAVGEG---NAQLVAIFGGQGNTDDYFEELRDLVLV-GDLIKFSAETLSELIRTTLDAEK--------VFTQGLNILEWLENPS-------NTPDKD------YLL--SIPISCAHYVVTAKL----------LGFTPGELRSYATGHSQGL-------VTAVAIAETDSWESFFVSVAITVLFFICYEAYPNTS-----LPP--SILEDS-LENN-EGVPSPML-------SISNLTQEQVQDYVNKTNSHLPAGKQVEI---S-----------LVNGAKN------LVVSGPPQSLNKAKAPS----------GLDQSRI-PFSERKLKSNRFLSPFHSHLLVPASDLINKVKNNVSFNAKDIQIPVYDTFD-----------GSDLRVLSGSERIVDCIIRLPVKWETTTQFKATHFGPGGTLDINPDD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |