Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | FARSKRGLRLKTVDSCFQDLKDSRLVEETFTVDEVTDMLDGLQTVVHSEVESELINTAYTNVLLLRQIFSQAEKWYLKLQTDISELENRELLEQVAEFEKSEFTSSNKKPSADLIKPKLAPLNEGGSELLNKEIARLQEENEKLKTRLKTIETQATTALGEKAKLEKSLKDLQMIQGDQKANVNQDITELENKVAALKCQFEKTLNDSTANQKSLEENLVTTKHDLLKVQDQLSTAEKELEKKFQQTAAYRNMKEILMKKNEQIKDLRKRLSK |
1 | 5xg2A | 0.15 | 0.12 | 4.08 | 1.69 | FFAS-3D | | ----------KGAIVRWGKRKEK-------LIEEIRAREEERNALVLGEIDRTFAVAREEFDTVVKELEEARKS-LYEGEARIKRAEEE-KERLKAEILTGE----------------------ARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELEL----ARKDLEKVLAEERAVREEIEVA----KRRINELDTLIERERGELAKLRGRIERLERKRDKLKKANPEARELTEKIRAVEKEIAALREELSR |
2 | 5nnvA | 0.10 | 0.08 | 3.00 | 1.21 | MUSTER | | -------------------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDES-----VDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKG-EEDNLARLKKELTETELALKEAKEDLSFLTSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTL |
3 | 5nnvA | 0.11 | 0.09 | 3.30 | 1.56 | Neff-PPAS | | -EELAESSAISAKEAKIEDTRDKIQALDE-SVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ---------------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES----------------SSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL------------- |
4 | 6f1tX2 | 0.13 | 0.06 | 2.03 | 1.17 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLI-----------LERQGHDKDLQ-----------LHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
5 | 5nnvA | 0.12 | 0.10 | 3.49 | 1.18 | PROSPECTOR2 | | AKELAESSAISAKEAKIEDTRDK--------IQALDESVDELQQVLLVT--SEELEKLEGRKEVLKERKKNAVQ------------NQEQLEEAIVQFQQKE-------------------------TVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNEL-TELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTL |
6 | 2tmaA | 0.17 | 0.15 | 4.81 | 1.67 | FFAS-3D | | ----NALDRAEQAEADKKAAEDR--------SKQLEDELVSLQKKLK-GTEDELDKYSEALKDAQEKL-ELAEKKATDAEADVASLNRRLVEEELDRAQERL-------------------------ATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEITNNLKSLEAQAEKYSQKEDKYEEELSDKLKEATRAEFAERSVTKLEKSIDDLEDELYA |
7 | 5xg2A | 0.16 | 0.14 | 4.50 | 1.08 | MUSTER | | GAIVRWGKRKEKLIEEIRAREEERLVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEIL---TGEARLPGLRERAENLRRLVEEKRAEISELERRLSSI----TSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELRGRIERLERKRDKLKKALEN------PEARELTEKIRAVEKEIAALREELSRVEGKLEGL------------------------------ |
8 | 6f1tX | 0.06 | 0.06 | 2.55 | 1.46 | Neff-PPAS | | --------VIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGH-DKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
9 | 4tqlA | 0.15 | 0.12 | 4.17 | 1.16 | PROSPECTOR2 | | Y---------KQMVQELEKAR-----------DRMEKLYKEMVELIQKAIE-LMRKIFQEVKQEVEKAIEEMKKLY-----DEAKKKIEQMIQQIK--------------------------QGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKLLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEIKKILQLIEKAKEIAEKVLKG |
10 | 5nenA1 | 0.10 | 0.07 | 2.56 | 1.59 | FFAS-3D | | ----------------------------------------------QVQAQAQVDSLDQYYTTLATEGRLLAERDGVTFSPILDAVKDKPRVAEIIALQT---------------------------QLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAADRYLEVQRQFAEVNSSI-----------DETVGRIGQLQKQLLESQQRIDQRFADYQREVRT--QLAQTQMDASEFRNKLQMADFDL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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