Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TRARNQGAEGSRGRGLGRTPSMQMAISSDSARKGAREPQSPGLVPGPVPHRPMGGPVEVGWDYAQWKQEREQIDLARVARHRDAQGDWRRPWDLDKAKPTLQDSGKPWEEGPARVGSTKGPRSHRKSQPPPLSLDGKGGTTRGGQPSRPSVVSATRSKARGTERLTGRARRWETKEDKEE |
1 | 6em5m | 0.13 | 0.12 | 4.21 | 1.38 | SPARKS-K | | QRNEQTDDSINP--------------YEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREKKLKEMKEKEKIENYQYDLWDSTETNDHVMHLRAPKLPPPTNEESYNPPEEYLLSPEENTEYSERERNFIPQKYSALRKVPGYGE--SIRERLAPRVRKNKLNIDPNS |
2 | 2tmaA | 0.08 | 0.08 | 3.09 | 1.36 | Neff-PPAS | | -EADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELCAELEEEIKTVTNNLKSLE |
3 | 4k0mC | 0.09 | 0.08 | 3.01 | 1.09 | PROSPECTOR2 | | KRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAA-----------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
4 | 6em5r | 0.06 | 0.06 | 2.43 | 1.33 | SPARKS-K | | -----------PQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGW-KGKQFAKKRYAEKVSMRKKIKAHEQSKVKRMITKHTFVGEGFTRRPVKMERIIRPSALRQPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELVWGKYQVTNEPDRDGCVNAVLL |
5 | 1jvrA | 0.16 | 0.11 | 3.49 | 0.46 | FFAS-3D | | --------------------------------------QIHGLSPTPIPKAPRGLSTH---HWLNFLQAAYRLQLRRFLKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQ----------------------- |
6 | 2xu8A | 0.18 | 0.06 | 1.81 | 0.28 | HHpred | | --------QGQQPWQF-QRLAAHLALTEQALRASIVAPLKRGGVY----------PESYQFAYRQWQERQAAGQ---------------------------------------------------------------------------------------------------------- |
7 | 1jvrA | 0.16 | 0.11 | 3.69 | 0.90 | MUSTER | | -----------------------------------HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPKGYPGRNILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF-------------------- |
8 | 5h2dA | 0.11 | 0.02 | 0.80 | 0.29 | CNFpred | | ------------------------------------------------------------DEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKE------------------------------------------------------------------------------------ |
9 | 5wlcSV | 0.31 | 0.04 | 1.34 | 0.66 | HHsearch-2 | | ---------------------------------FVKDHRYPGLTPGLA---PVGLSDEEDSS---------------------------------------------------------------------------------------------------------------------- |
10 | 4b03D | 0.13 | 0.10 | 3.44 | 1.28 | Neff-PPAS | | ------------FHLTTRGGEPHMIVSKQERGKSLLFKTSAGVNMCTLIAMDLGELCEDTMTY--------------------------KCPRITETEPDDVDCWCNATETWVTYGTCSQTGEHRRDKRSVALAPHVGLGLETRTETWM--------SSEGAWKQIQKVETWALGHPGFT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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