Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | ERQCLAEAEQEDQPEEEAEQSQQKLWHLFQNSATAVAQLYKDRVCQQQGLSLWVPFQNAATAVTNLYKESVDAHQRSFDLGIQIGYQRRNKDVLAWVKKRRRTIRREDLISFLCGKVPPPRNSRAPPRLTVVSPNRATPTETGSSVETDLQPFREAIALHGLSGAMASISVRSSTPGSPTHVSGSSNTGRRRNGLHDVDLNTFISEEMALHLDNGGTRKRTSAQCGDVITDSPTHKRNR |
1 | 5cwcA | 0.16 | 0.11 | 3.64 | 0.77 | SPARKS-K | | VKICVENAKRKGDDTEEAREAAREAFELVREAAERAIRLIKECVEQREGYD----ISEACRAAAEAFKRVAEAAKRASSEVLELAIRLIKECVENAQREGYD-ISCRAAAEAFKRVAEAAKRAGI----------------TSSETKRAIEEIRKRVEEAQREG---------------------------------NDISEACRQAAEEFRKKAEELKRR------------------ |
2 | 6h7wQ1 | 0.15 | 0.12 | 3.92 | 0.76 | FFAS-3D | | -EDALIAVRQQTAMMRKFLDTPGKLMDALKCCSTLVSELRTSSLSPKQYYELYMAVFDALRYLSAHLRENYELVQYRLYLMITVGVKELMKDMMDMSRGVQHPVRGLFLRYYLSGQARDY---------LPTGDSDGPEGNLQDSINFILTNFVEMNKL--------WVRLQHQGHSRE----------RDLRTQERRELQLLVGSNIVR----------------------------- |
3 | 6n3qE | 0.16 | 0.07 | 2.37 | 0.28 | HHpred | | ---QIKEMSENEKHELNRGAESVRRSLKLKELAPQINLLYKNGS---IGEDYWKRFETEVKLIELEFKDTLERLQLFVMVCKEICFNQALSRRYQSILKR-----KEVCIKEWELKINN------------------------------------------------------------------------------------------------------------------------ |
4 | 5cwqA | 0.10 | 0.09 | 3.42 | 0.77 | MUSTER | | EEAERRLQEARKRSEEARERDLKELAEALIEEARAVQELARV-ACERGNSEEAERASEKAQRVLEEARKVSEEAREQDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARR--VEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH------------ |
5 | 4gmxC | 0.07 | 0.05 | 1.86 | 0.65 | CNFpred | | PNMAWDTIVEQSTANPLDSETVKIIANIIKTNVAVCTSMGAD---------FYPQLGHIYYNMLQLYRAVSSMISAQVAAEGIATKTPKVRGLRTIKKE------ILKLVETYISKARNLDDVVK-----------------------LVEPLLNAVLEDYNVPDARDAEVL--------------------------NCMTTVVEKVGHMI--------------------------- |
6 | 4fcyA1 | 0.09 | 0.03 | 1.12 | 0.53 | HHsearch-2 | | --------------------DREALWSKWDNASDSQ--RRLAE-----------KWLPAVQAADEMLNQGISTKTAFATVAGHYQVSA--STLRDKYYQV-QKFAKPDWAAALV----------------------------------------------------------------------------------------------------------------------------- |
7 | 5cwpA | 0.09 | 0.08 | 3.18 | 0.94 | Neff-PPAS | | RELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE------------------- |
8 | 5fmfS1 | 0.13 | 0.03 | 1.02 | 0.35 | HHsearch | | --------------------------------------------------------------------------------------SSKLLWATEYIQKKGKPVLVNELLDYLSMKKD---D-----------------------------KVIELLKKLDR------IE--FD-KG----------------------TFKYL----------------------------------- |
9 | 4pmuA | 0.11 | 0.10 | 3.45 | 0.74 | SP3 | | ADAFVAYAQRDFTTADGRPNTPAQQLERMRAHIAAVAGRYTGKVQDEDGSYRSTNWVQRVGDGDTVVRNAFAFAQRYAQLYYRPAKREGIVRMVKMLQQAGVRISLRDIEDAIDGVVLPLTKEGQIIGTGMAHKQFQLPPYRDGLPADVQAQLRDRYAE--LFALFWRKRDKGVSDDMSWKNDYPVPGRTNYPLLFDRNVVAVPSA--------------------------------- |
10 | 3l0mA | 0.09 | 0.09 | 3.49 | 0.87 | PROSPECTOR2 | | PLGSPYSDAKALDEVAKIRELGVQRVTRIENLENAKKLWDNANSLEKGNISGYLKAANELHKEDDLRPELSDKTISPKGYAILQSLWGAASDYSRAAATLTESTVEPGLVSAVNKSAFFDCKLSPNERATPDPDFKVADPTSKIWHNTKAETLESVLSSKGENLSEYLSYKYATKDEGREHRYTASTENFKNVKEKYQQLADFKDKQIVAELKSKDEYRAKGQGLTTQLLGLKTIKSQE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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