>PF15244 (414 residues) TSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLQLVKNHMAVHYNKILSAKAAVDCS VPLSMSASIKYADQQRREKLKKELARCERELKLTKTAMQSNSKSNSKSLFNTLQKPPGEP QDEDAMLIEEVNRFPSFKRSPVTSSERLHLNPPKSDKVLTNGTEKNSSSFLSSMDHAASG PRKSSSGTSYGRRPRSTSLNSQRFQLVISKAPSGDLLDKHSELFSNRHLPFTPRTLKTEA KSFLSQYRYYTPAKRKKDFTDQQIEAETQTQLSSFQSDFETVEIKNFTDSEMNIKQASNC MSYGTKGKITPLPLQGHELPWDEVKDSALQCSSSRAVCQCSLQPPSGRKIYSDEEELLYL SFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHHLEEEKMRHLLHILKVDLGC |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLQLVKNHMAVHYNKILSAKAAVDCSVPLSMSASIKYADQQRREKLKKELARCERELKLTKTAMQSNSKSNSKSLFNTLQKPPGEPQDEDAMLIEEVNRFPSFKRSPVTSSERLHLNPPKSDKVLTNGTEKNSSSFLSSMDHAASGPRKSSSGTSYGRRPRSTSLNSQRFQLVISKAPSGDLLDKHSELFSNRHLPFTPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQQIEAETQTQLSSFQSDFETVEIKNFTDSEMNIKQASNCMSYGTKGKITPLPLQGHELPWDEVKDSALQCSSSRAVCQCSLQPPSGRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHHLEEEKMRHLLHILKVDLGC | |||||||||||||||||||
1 | 5h7iC | 0.10 | 0.09 | 3.29 | 1.45 | SPARKS-K | ------------------------VPVIDLNRVSD----EEQLLPVVRAILLQHDTFLLK---------NYANKAVLDALLAGLTTSQGFDANFTGTLPLEDDVWLEQYIFDT---DPQLRFDRKCRNESLCSYSRLFKLGLFFAQLCVKSVVSSAELQDCISTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDEPDCLLHTGTLLARWS----QGMHTTSPLQIDPR-----ANIVSLTIWPSILRLQDAMKFVKELFTVCTVLSLNALSRSTGVPELHVLLPQISSMMKRKISDAYVVELNSRGELTMNLPKRDNLTNKSRTLAFVERAESWYQQVIASSQRQKRYQQFLAMKMTQVFDILFIVDSLQDEILAGLQGILPMDLDKNRFSKLLQIHKSKQQD | |||||||||||||
2 | 2atyA | 0.11 | 0.09 | 3.24 | 1.10 | MUSTER | SCGSP----PPILNGRISYYSTPIAVG-TVIRYS------------------------CSGTFRLIGEKSL------------------LCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPK-VVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSEPIMHQDWLNGKENSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSTDFFPEDITQPAENYKNTQPIMNTNESYFVY-VQKSNWE--AGNTFLHEGLHHHTEKSLSHSPGK------------------- | |||||||||||||
3 | 5mqfM | 0.08 | 0.08 | 3.15 | 1.77 | Neff-PPAS | -VFMHKMPRLWLDYCQFLMDQGRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG | |||||||||||||
4 | 6fmlG | 0.09 | 0.09 | 3.35 | 1.16 | PROSPECTOR2 | QPKLDIWGPVPDFKVLPYWGTAFWDRKHTTYKKDSPFLVVSDVAYWFSKDIESHAQSNTKLNEDQLKRLHMIYRQRAQSLRNQISIMDLDSAADTSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPLFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTLAKLDELLRELKEGGHQMTRMID-LMEEYLTYRNYKTKLEDRRDTVADFQTRPEI | |||||||||||||
5 | 5jcss | 0.07 | 0.07 | 2.69 | 1.39 | SPARKS-K | STVRINEDHQKDNKIYNLNMMRIWNEEPSEEDLTH--------------ILAQK----FPILTNLIPKIDS--------YKNVKSIYMNTKFISLNKGAHTRVVSVRILFKNNGINKPDQLIQSSVYDSIFSEADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEP-----VLKTTVVQQLAKMLAKKLTVYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCWNEAYKMAQSILKITNTENENENARLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSVKTIRAGEWLLLDEVNLATADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPAT | |||||||||||||
6 | 5yfpH | 0.12 | 0.09 | 3.35 | 0.88 | FFAS-3D | ------------------LANPHFNAKDFVHDKLGN-ASAITIDKFTSNLTDLSIQVQEEVKLNINKSYNEIMTVNNDVAMLELKRVRANINDLNEVLDQIDQERMRRDRSSVLILEKFWDTELDQLFKNVEGA----QKFINSTKGRHILMNSANWMELNTTTGKPNDLVLIADKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLLFKFSNSN------------SSLYECRDA-DECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGRENN--------------------------------------------RSPNKNKRRSMGGSITPDMSSTAQRLKFLDEGVEEIDIELARLRFESAVLLDIISLKIEQRREAISSVHLKSGTENM-IKLG- | |||||||||||||
7 | 2pffB | 0.16 | 0.09 | 2.90 | 0.45 | HHpred | ---FTPGELRSYLKGATG-HSQGLVTAV---AIAETDSWESFFVSVRIGVRCYEAYPNTSLPPSILEISNLTQEQVQDYVNKTNSHL-------PAGKQVEISL-----VNGAKNVSGPPQSLYGNLTLRKAKAPSLDQSRIPFSER-KLKFSNRFLPVAS-------PFHSHLLVPASDLINKD-LVKNNVSADIQIPVYDTFDGSDLRVLSGSISERIVDCIIR-----------------------------------LPVKWETTTQFKAFGPG-GASGLGVLTHRNKD------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3tnfB | 0.09 | 0.08 | 3.02 | 0.97 | MUSTER | --------------------------------LDEYEQAIKRAQENIKKGEELEKKL------DKLERQGKDLEDKYKTYEENLEGFEKLLTDSEELSLSEINEKMEAFSKDSETQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPA----------ALEKAQKDYSQSKHDLATIKMEALIHKLSLE------MEKQLETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEFNEKGEEVTSLNDGKDQQLFNLGGKFYPIHKEQKILEKDKQGEDWESIKSPEKQKKAEHDFHKLQETPVKKLVHHNKGLETTIHKERVEETKQ-QLEDNGKEKIEIANNISK | |||||||||||||
9 | 4dzsA | 0.10 | 0.04 | 1.44 | 0.55 | CNFpred | -----------------------------------FQFIFDAISDSCIDIATHRHGCC-----VLQRCLDHGTTEQCDNLCDKLLAL-------------------------------------DKLTLDP--------------------------------------------------------------------------------FGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIH-----------------------------------------FGSNVIEKILKT------------------------------------------------AIVSEPMILEILNNGGETGIQSLLYGNYVLQTALDISHKQ-----NDYLYKRLSEIVAPLLVG | |||||||||||||
10 | 5wzgA | 0.15 | 0.11 | 3.76 | 0.37 | HHsearch-2 | KGVSLDSP---ELYGA---KSSKALPHQGFPGMLTKYLQVDQYSSLVL-----QTALRLMLKQD---------EQ-LLEIIPLILRCNGFHILESMKDNSFSH--------LVEVLEVAPESLYNEMFNK-----VFK-------NSLFLVDRCANFVIQAADQEQMGIMWEELAPRFKDLLQGKSGVVAS-----LIAVSQRL-----QSHENKCCEALVGAVCSTRISILPRLLF------LDYY---FGCRDKSTWEWAPGAKMHVMGCLILQGIFKFSS-DH--IQPYITSLT----SMKA-EYIT---------ETAKDSSG------AR-VIEAFLASD----AATK----QKRRLIIKLRGHFLSLHTSGSFTVEKCFDAC--------NLTLREAIASELLDDLSK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |