>PF15181 (262 residues) MFLFSRKTKTPISTYNDSYRAPTSIKEVYKDPPLWAWEANKFVTPGLTQTMERHVDPEAL RKMVKCNNQDYTYKSSISGHPYLPEKYWLSQYEADKCSPCYLSSDRYNTWRTAPYNSPYW NKYTTCLPRLPKDAGMETVARGMPLEYPPKPERLNAYEREVVVNMLNSLSRNQQLPRVMP RCGCLDPLPGRLPYLGYESACSGRHYCLRGMDYCTGEAPYTERRLRPLCAEQPTGCVTLR PPARNGMCCYNSPAVILPMSEP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MFLFSRKTKTPISTYNDSYRAPTSIKEVYKDPPLWAWEANKFVTPGLTQTMERHVDPEALRKMVKCNNQDYTYKSSISGHPYLPEKYWLSQYEADKCSPCYLSSDRYNTWRTAPYNSPYWNKYTTCLPRLPKDAGMETVARGMPLEYPPKPERLNAYEREVVVNMLNSLSRNQQLPRVMPRCGCLDPLPGRLPYLGYESACSGRHYCLRGMDYCTGEAPYTERRLRPLCAEQPTGCVTLRPPARNGMCCYNSPAVILPMSEP | |||||||||||||||||||
1 | 2cseH | 0.11 | 0.11 | 3.88 | 1.15 | Neff-PPAS | -SLQRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRGMLSFVCQMHAMMNDVSPEDLDRVRTEGGSLVELNWQVDPNSMFRSIHSSWTDPLQVVDDLDTKLDQYWTALNLMIDSSDLVPNFMMRDPSHAFNGVRLEGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGGLSHYSRATTPILGKMPFSGMLTGNCKMYPFIKGTAKLKTVRKLVDSVNHAWGEKIRYALGPGGMTGWYNRTMQQAPIVLTPAALT | |||||||||||||
2 | 4btgA3 | 0.08 | 0.08 | 3.16 | 1.04 | PROSPECTOR2 | GFNLKLKNQLSVGALQLPLQFTRTFSASMTSELLRLWSPSTPKELDPSARLRNTNGIDQLRSNLDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLPMVAIAALRTGIVDESLEARASAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDIHIWP | |||||||||||||
3 | 3j3iA | 0.11 | 0.10 | 3.62 | 0.81 | SPARKS-K | SRLVTQMDATPQMRIFSDTADYADMLHLTIFEGLWLVQDASFLVNGEKLLSADRAGYDVLVEELTLANIRIEHHKM-------PTGAFTTRWVAAKRDSALRLTPR--SRTAHRVDMVR---ECDFNPTMNLKAVSEVPLAHVFRSPPRRESTTTTDDSPRWLTREGPQLTRRVPIIDEPPAYESGRSS--SPVTSSISETSQHEEEMGLFD--AEELPMQQTVIATEARRRLGRGTLERIQEAALEGQVAQGEVTAEKNRR | |||||||||||||
4 | 5hx2F | 0.10 | 0.06 | 2.13 | 0.46 | FFAS-3D | --IFRNLAGYRLRTYYGSPRPEELANAIYGNPQLY-W--VLLMCNDNYDPYYGWITSQ--EAAYQASIQKYKNVGGDQIV------YHVNENGEKFYNLISYDDNPYVWYDKGDKARKYPQYEGALAAVDTYEVLENEKLRQIKIIAK-------SDINSFMNDLIRIMEKS------------------------------------------------------------------------------------------ | |||||||||||||
5 | 2pffB | 0.14 | 0.12 | 4.15 | 0.35 | HHpred | ----YLKGATGLIAETDSWESFVSVRKAITSLPPSILEDSLENNEGVPSPSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPQSLYG---LNLT----LRK---AKAPSGLDQS---RIPFSERKLKFSNFLPVASPFHSHLLVPANKDLVKNN---VSFNAKDIQI-PVY---------DTFDGSDLRVLSGSISERIVD-------CIIRLPVKWETTTFKATHILDFGPGSGLVIVAGTLDINPDD-- | |||||||||||||
6 | 1uf2T1 | 0.16 | 0.14 | 4.72 | 0.64 | MUSTER | ---MSRQMWLDTSALLEA--ISEYVVRCNGDTTGDFNALSNMFTQLSVSSAGYVSDPRVPLQTMSNMFVSFI--TSTDRCGYMLRKTWFNSDTKPTVSDDFITT--YIRPRLQPMSDTVRNNLSLQPSAKPKYERQNAIMKGLDIPYSEPDFDVSDF----LTTFLSQLRACGQYEIFS---DAMDQLTNSL-ITNYMDPPAI----PAGLAF---TSPWFRERARTILALQNVDLNIRKLIVRHLWVITSLIAVFGRYYRP | |||||||||||||
7 | 5lg6A | 0.09 | 0.03 | 1.32 | 0.39 | CNFpred | -------------------------------------------------------DEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALD----NTLFLNGEKEYMPWQAALSSLSYF------SLMFDR-----SEVYGPMKKYLRKQVEPLFQHFETL------------------------------------------------------------------------------------------ | |||||||||||||
8 | 2pffB | 0.17 | 0.15 | 5.03 | 0.63 | HHsearch-2 | KRPFDKKSGNAQLVATDDYF--EELRDLYQTYHVTTLDAEKVFTQGLNILLENPSNTIPLIGVIQLALRSYLKGATGHSQGLAETDSWESFFVAVRCYEAYPN--------TSLPPSILNNVPSPMLSNLTQEQVQDYVNSHLPAGKQVEPQSLYGLNLTLRKAKA---P--SGLDQSRPFS------ERKLKFSNRFLPASPFHSHVPASDYDTFDGSDLRVLSGSISERI--VDCIIRLPVKWETTTQFKATHILD-FGP | |||||||||||||
9 | 3cnfT | 0.08 | 0.08 | 3.27 | 1.09 | Neff-PPAS | LFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLFHYRSESDMIDHFAAKILEDWRQEKLDKGALVEADRVVQRLIPLSSSTYVQAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYI | |||||||||||||
10 | 3gniA1 | 0.15 | 0.06 | 2.05 | 0.59 | HHsearch | PFPFGKSHKSPA-----------DIVKNLKESMAVLEKQDI----------SDKKAEKATEEVSKNLVAEILYGTNKEPQT-----------E------------AVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQ--------------------IFNNILRR---------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |