Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | SDFLESKGCFANTTPSGKSVSSSSSVETGPSVSEPPGLPRVSAYVDTTADLDRKLSFSHSDHSSEMSLPEVQKDKYPEEFSLLKLQTKDGHRPEWTFYPRFSSNIHTYHVGKQCFFNGVFLGNKRSLSERTVDKCFGRKKYDIDPRNGIPKLTPGDNPYMYPEQSKGFHKAGSTLPPVNFSIVPYEKKFDTFIPLEPLPQIPNLPFWVKEKANSLKNEIQEVEELDNWQPAVPLMHML |
1 | 5jcss | 0.08 | 0.08 | 3.11 | 1.28 | SPARKS-K | | NATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSF-VFNFVEGSLVKTIRAGEWLLLDEVNLATAD-----TLESISDLLTEPDSRSILLSEKGDAEPIKAHP----DFRIFACMNPATDVGKRDLPMGISRFTEIYVHSPERDITIDKYIGKYDIAELYLEALSDNNTGSNQKPHFSI |
2 | 2tmaA | 0.08 | 0.08 | 3.16 | 1.92 | Neff-PPAS | | DRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDLKEAETRAEFAERSVTKLEKSIDDLEDLYAQKLKYKAISEE |
3 | 4k0mC | 0.04 | 0.03 | 1.59 | 1.09 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----------------------AAAAAAAAAA |
4 | 5kcs1w | 0.11 | 0.10 | 3.52 | 1.26 | SPARKS-K | | KEKLSAEIVIKQKVYPNVCVTNFTESEQWDTVIENDDLLEKYMKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDTNKFYSSTHRGPSELCGNVFKIEYTKKRQRLAYIRLYSGVLHLSEKEKIKVTYTSINGELCKIDRAYSGEIVILQNEFL-----------KLNSVLGDTKLLQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDS----------DPLLRYYVDS |
5 | 2cseB | 0.13 | 0.13 | 4.38 | 0.49 | FFAS-3D | | ---VTGDG-NVFKPSAETSSTAVPSLSLSPGMLNPGGVPWIAIGDETSVTSPGALRRMTSKDIDEPLVTEHAIANFTKAEMALEFNDKLRVLSVSPKYSDLLTYVDCY-VGVSPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPGERRYPKEAAVALAKRNGGIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPV |
6 | 5ljxA1 | 0.18 | 0.12 | 3.84 | 0.32 | HHpred | | -------------------------------WNDAHGVGSVPMHTDLELDFSLTSSSKYNPA-QSIDL-HI--EIEEQTIGV-DVHAGHWFDGRLNLKTSFK---YEYPWHAKCHYEGLYLDEENLCKIIDMNDCFVSKVCISTCQFGDPIMSPRDKGFLCPEFPGSFRKK-ATTPICEYDGNMYKKTIDSFQSFNTST--------------------------------------- |
7 | 1kanA | 0.13 | 0.11 | 3.82 | 0.77 | MUSTER | | KERILDKDVKASLGRQTDGPYSMSTEEAEFSHEWTTGEWKVEVNFYSEEILLDYASQVESDWPLTHGQFFSILPIYGGYLEKVYQTAKSVEAQKFHCALIVEELFEYAGKWR----NIRVQGPTTFLPSL-TVQVAMAGAMLIGLHHRICYTTSAS----VLTEAVKQ----SDLPS------GYDHLCQFVMSGQ--LSDSEKLLESLEN----------WNGIQEWRHGYIVDVSK |
8 | 2pffB | 0.15 | 0.13 | 4.55 | 0.97 | HHsearch-2 | | KILPEPTEGFAADDEPTGYVSSLVEENCYLEGNDIHALAAKTARIMAKRPFDKKSNSALNAQNTDDHVLVGDLIKSAETLELIRTFTQGLNILEWLENPSNTP-DKDYLLQLAHYVVGELRASGPPQSLYGLNLTLRKAK-----------APSGLDQSRIPFSERKLKFSNRFLPVASFHSHLLLVKNDIQIPVYDTFRVLSGSISER--------IVDCIIRLVKWETTTQFKATH |
9 | 2bsgA | 0.06 | 0.06 | 2.70 | 1.59 | Neff-PPAS | | KDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTSAIKTSISIITSVNTNTDNIASINLEIKQRLTVIERANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEA |
10 | 1p7aA | 0.14 | 0.02 | 0.72 | 0.17 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH---------MLV--------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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