Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | CTERHLAKRLKDNSFYPFTQQQPNVFVLEYYLDTLWKGTLLFVVCLLFVSFGFLSQVQNQETWGFPAYGVGVGLWLMISSLPRRRLVLNHTRGMYHFSIEGRTVCQGPMHLIYLRLALNSDAYGRCFFQLVLCGHKLEPLVLVQLSERYEQMEYLGRHIARKLNINYFDYLATSYRHVVRHWP |
1 | 3klxA | 0.08 | 0.06 | 2.42 | 0.61 | SPARKS-K | | DEFSTLDSIIRTHHTF---PRSPNTCTSLIAHHAIWRFVRDF-----ANPNKYKHFIKSCTIREVSVA----------STSVEILEVLDEEKRILSFRVLGGEHRLNNYR-SVTSVNEFVKKRVYSVVLESYIVDIPQGNTEEDTRMFDTVVKSNLQNLAVIST------------------- |
2 | 5uwaA | 0.09 | 0.08 | 3.08 | 0.53 | FFAS-3D | | -AAQKTFDRLKNEQ----PQIRANPDYLRTIVDQELLPYVYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGIVPIRVTIIDPNPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNEWGTLLRTIDGLTAQLKSISQ------------------- |
3 | 2kd2A | 0.15 | 0.07 | 2.20 | 0.33 | HHpred | | ---------------WVL-RLDGEDLRVVLEKDTMD--------------VWCNGQKM--E--------------------TAGEFVD--DGTETHFSVGN--------HDCYIKAVSSGKRKEGIIHTLIVDNREIPELT------------------------------------------ |
4 | 4i6jB1 | 0.12 | 0.11 | 3.90 | 0.57 | MUSTER | | THPELIKQIIKRHSNHL------QYVSFKVDSSKESAEAACDILSQLVLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSSSLKIDDT----PVDDPSKVLVANNSDTLLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHEHLRIDVVSENPGQTDAFIRHSP |
5 | 4h73A | 0.13 | 0.11 | 4.01 | 0.67 | CNFpred | | RLIQNAAELARHYSTISVVFKRSKGVVGVITPYPLSISMKKIAHTLAVGNTVVYKP-----ASDTPVTGWLIAQMVAKAGLPKGVFNLVI---GPGPVVGEEIVTHKRVAHVTFTGESSTG--TLKTVTLELGG--SDPLIILDD----VDVDYAARLAVFASL-FHQGQICTSAKRIIVHKA |
6 | 2lonA | 0.12 | 0.05 | 1.72 | 0.40 | HHsearch-2 | | CVSEKLLRKTRESPLVP-------------------IGLGGCLVVAAYRIYRLRRGSMSIHLIACAVGAIMLGAVYMYSDYKRMAQ--DAGEK------------------------------------------------------------------------------------------ |
7 | 1e2fA | 0.11 | 0.10 | 3.59 | 0.76 | Neff-PPAS | | ---RKLVEALCAAGHRAELLRFPESYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDL--VLFLQLQLADAAKRGAFGHERYENRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATA-------TEKPLGELWK |
8 | 2kd2A | 0.15 | 0.08 | 2.58 | 0.42 | HHsearch | | -GPLGSENRSKTTSTWVL-RLDGEDLRVVLEKDTMD--------------VWCNGQKME-T---------------------AGEFVD--DGTETHFSVGN--------HDCYIKAVSSGKRKEGIIHTLIVDNREIPELTQ----------------------------------------- |
9 | 4i6jB | 0.12 | 0.11 | 4.04 | 0.56 | SP3 | | THPELIKQIIKR------HSNHLQYVSFKVDSSKESAEAACDILSQLVLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSSSLKIDDTP----VDDPSVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLNPGQTHFHTIQKDAFIRHSP |
10 | 5lq6A | 0.07 | 0.06 | 2.45 | 0.58 | PROSPECTOR2 | | SSQD-IISRINSKNINNNDSNEKDALSIELYPQNLSRDNLVLLSACLHYNIHHRQDILSSKLDSAIVDKIIFEILNRYDIKRESSFIIS----AENYIAPIIGESRHDFNAVVI-----SEYDKKPYVQFIDSWKTSNI------LPSLQEIK---------------KHFSSSGEFYVRAYD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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