>PF15149 (520 residues) FNDIHLGKLIHSRKTGTAYIRKILQHNTPEGFLSSVIAEIIDPFGIEEVHESSCLSSSLS VNQAGNFSYKLSLQLQSVTSSFQDSDIEKTVVIPGYSSFLITRILDNENALAIATMPETV PHNMTFLKGSWFLYNFGQRDGRTWNIHSKPCNYWFQQHDDSLSLNVLKYIDLGKSHTLKI KVIPNTKGVQTLEIPLLKVVVGNPNLLEVKAEGYFDDADSYLMEISAASKTLRQGSTSLA FIVWGASTECLVTTFVPTLKSSCSYLKSMHHIPSEIIPLEDWISGVHMDSQGFNMIKVLP INYRPPSNMGIAIPLTDNFYHADPSKPIPRNLFHKSKKTGKFKQCANVSTREECNCTNDQ KFSHAVAFSDCREKVPRFKFPVTQYPISLKIYSEDGHIPVETPYLVTVTEVNNRENWNLK HTVPENVKKMKDYLESILHAPVYNPLGLNLSIKGSELFHFRVSVVPGVSFCNLGEEFQIY VDEAPLPFPGHTLIALAAAVLLGGLIFIAFMFQIRNIHLW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FNDIHLGKLIHSRKTGTAYIRKILQHNTPEGFLSSVIAEIIDPFGIEEVHESSCLSSSLSVNQAGNFSYKLSLQLQSVTSSFQDSDIEKTVVIPGYSSFLITRILDNENALAIATMPETVPHNMTFLKGSWFLYNFGQRDGRTWNIHSKPCNYWFQQHDDSLSLNVLKYIDLGKSHTLKIKVIPNTKGVQTLEIPLLKVVVGNPNLLEVKAEGYFDDADSYLMEISAASKTLRQGSTSLAFIVWGASTECLVTTFVPTLKSSCSYLKSMHHIPSEIIPLEDWISGVHMDSQGFNMIKVLPINYRPPSNMGIAIPLTDNFYHADPSKPIPRNLFHKSKKTGKFKQCANVSTREECNCTNDQKFSHAVAFSDCREKVPRFKFPVTQYPISLKIYSEDGHIPVETPYLVTVTEVNNRENWNLKHTVPENVKKMKDYLESILHAPVYNPLGLNLSIKGSELFHFRVSVVPGVSFCNLGEEFQIYVDEAPLPFPGHTLIALAAAVLLGGLIFIAFMFQIRNIHLW | |||||||||||||||||||
1 | 4oj5A | 0.11 | 0.10 | 3.49 | 1.01 | SPARKS-K | LPDAAAVNSYMEQVAVKIDLTKLYRFTETLYIPPGVSIEIPTSNFFTREDKNTAAISLMVYRKQPDGSYKLN---KDVDYYPTGLDIGDAITCARKNNLNLITAPGVKVGVKWIGGAGCTTKGLSINTGVGLLQSAS------WGSIHENLRILYKTQ-------GAVFIDSNGGAAVNISRLGNTNGEEQAVYKPVAVTQFAGSEVKFNSPIIEDSYGLFMVDPHIESSGKKKHSFYLIVTLSGVGLSGQDPLDSMYFLKNCPETARNVVRGQM--PISGVKLVRGTGNYPTLVLDCT-----NMGSQFQFGEVGDIFYIKDVVGVKADTLYIDPVNGNNY----NWGTNGTKPIRELTNIAKICQLFRCK-SVYLNAITSNTELPMVVFEGP-GSLKANSGSSFLILSLIGLSGISTDGGHM---------------FRVSTVEKVNIHTNGAAYVVLSYRQLFYSVNCSKQTIAGIMVKTATRPTGIDAAPVDGNVSLTYKIIE------------- | |||||||||||||
2 | 2qqpG | 0.09 | 0.08 | 3.11 | 1.49 | Neff-PPAS | ----------GGRGTMDPPVHEICAQSIDPSEGAVGFYKYMDPAGAVESGKALGEFSKVPDGLLR-YSVDAEQRPIVTIECPTVSESDLPLDGKLWRVSFISFPAFRLNFIALANINNEALTLETRNTFIQTLNNITDLGTGQWAQFAPGWYYSIYVLPNTYAMAETDSVTQFRKVYKGITFEFNAPTLIDQGWWVGAHIPVKPQSETIPAAERFSAGSMTVSASNAIFQPSNTVARIVWSITPLPVATVALTTGTGGTNNTSGKFFSVEIDGNVNSVWTFTAPASILAEGEPFAEEGDTTSFSMTTITADTVVYSVSSS---------------LTGSSVIVRGVTK-------GSGVSITPVTVGIDTEAVNRLSIEMPALTTEEVTTNVPKYEQFLCKESYIVHYKMNNPVFEMTGEENFGGF-----QFHYPGYDPENNALGLRGIVDTFENNFSSAVVHFWGISQATIVCKTYDGWEGTTNAGSTVGQFAHTGAEEEDEVVQLANRLQMELTGVY | |||||||||||||
3 | 4aq1A | 0.09 | 0.08 | 3.09 | 1.38 | PROSPECTOR2 | WSVQDAVTVVTAVKPGTADVTAKVTLPDGVVLTNTFKVTVTEV-----PVQVQNQGFTLVSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSKASFEVTFKDNTKRTFTVDVKKEPVLQDIKVDATSVKLSDEAVGGGEV----EGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNTEGLVIKNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASD-TTPTSTKTITVADATPVGLDIVAPSEIDVNAPNTASTADVDFINTATTLVGTNDYVEVNGNVLQFKGNDELTLLTSSSTVNVDVINSASVPASATVATSPVTVKLNSSDNDLTFEELIFEDINEFIAVSKAAKNNKPLVTVKDASGEV---IPTGANVYGLNHDATNGNIWFDEEQAGLAKKFSDVHFVSSSPSLSDAIQLTNSGDAVSFTLVIKDDNNLLAAPVSVNVTVTKGS----------------------------------- | |||||||||||||
4 | 5x7oA | 0.10 | 0.09 | 3.36 | 0.99 | SPARKS-K | GQTYSGGQTIHYPVNADLFVKQIPNQQVLDTVNVDIFFTYYSSYDYESG---SSFEQRLAAQDLSS---SVRVEVGAGSGSYTPDVQHYVLKIHGRAGWASGRDIYGDVTYVKLPAASGSATVVEVSAATHAIYEVGATPTTRAGINTNHSGYSFVDKLDVPGAAVTVYANAPVDYPVELRYANGSGSAK-----TLSVYVNAARVLSLADTGAWSQWGTQTTTLPLTA-----GQNIITYKY-DSDAGDTGGVNLDYIRVPFAPTQAEYAAESAK------LWGGAGTSQDHWFYKGAAFVDNLTGVGAEASFDVYARYANGTGSTKTLSAIVNGGAASTVTTSPGMNWNLWNEHTMTATLT-----AGRNTISFRRGNSGNVNLDRLAVSASAITTLASERNLL----DNG--DFERDTTYNSNWT------QWQPSHPPEGPARRRAYFHSDQSIHQVVDVVNNA---TYRLEAKVRMKNTTPTTARAEVQGHGGSPIYANISNDGVWKTIVIDNIN | |||||||||||||
5 | 5lqwX | 0.09 | 0.08 | 3.06 | 0.75 | FFAS-3D | FVDLEA----GSKREQSQLCTHLELYDTADELKLIAKFQLFATISMKSLDLPSGSRAFLALTSDSGNLSIVQIHAGALRTTLRRVSPISYMEIDPNGRCIILSSVEQN--KLCFLVDYMAVVDVNFNNPCFVTLEIDNAATQLSVHLELGLNHIVKKADYLVNPSANFVLSLPDLSRYNITTSLSDNNNP-----FVVIGFENNVTIISGIVQKLKNDFFVLLQLTVSPDTRPLVQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKNDFSNVLEPSKLQNLSILSQQL-NLNP--SIKSQIVSDSPLSFTNNKIITLTNAVNY-SNLISTSLPPNATKLWLIPDPTTGDNTMILQIDNTPDEATRSAFLSQDTTIHTCLMGSHSIIQVCTAELRHITGKSRYSNWVPPAGIR-------------IVCATSSKTQLIISLSNYELVYFKIDLIELTTHPELDTMLAIADNEGMI---------------------------------- | |||||||||||||
6 | 6eznG | 0.10 | 0.06 | 2.31 | 0.44 | HHpred | ---------------------------------------------------------TVDLYDKEQRLFDIIV--FPTKKNLAQIPVKQLIFFENEGNILCM--SSPGVPNTIRLF--LNELGIYPSPKGHVIRDYFSPSS-E---------ELVVSS-NHLLNKYV--Y-NAR-KS-EDFVFGESSAAL--------LE-NREQIVPILPRTSFTESKGK-------CNSWTSGS---------------QGFLVVGFQN--LNNARLVWIGSSDFLKNKNQDSNQ----EF------------------AKELL-------------K---WTFNEKSVIKS-VHA-------------VHSHADGTSYDEEPYKIKDKV-IYSVGFSEWNGEEWLPHIADD-I-QFELRQVDPYYRLTLSPSG---------NDSETQYY-----TGEFDRHGVFTFLTDYKIGLSFTTDKDVKAIRHLANEYPRSNSWYISAICGVIVAWIFFVVSFVTTSS---- | |||||||||||||
7 | 3s6pA | 0.12 | 0.11 | 3.89 | 0.85 | MUSTER | LAQSLDANTVTFPANISSMFRNWAKGKIDLDSDSIGYFKYLDPAGARAVGEYSKILVKFSVDAEIREIYNEECPVVTDVSVPLDGRQ-SIFSFPMFRTAYVAVANVENKEMLIEWLNNLADWRYVVDSEQW--INFTNDTTYYVRIRVLRPTYDVPDPTEGLVRTV-------SDYRLTYKAITCEANMPTLVDQ--FWIGGQYAL-TPTSLPQYDVSEAYALHTLTFARPSSAAALAFVWAGLPQGGTAPAGTPAWEQA---SSGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAGDTVTFRQVAVDEVVVTNNPAGGGSAPTFTVRVPPSNAYTN---------TVFRNTLLETRPSSRRLELPMPPADFGQTVANNPKIEQSLLETLGCYLVHSKMRNPVFQLTPASSFGAVSFNN-YERTRDLPDYT--GIRDSFMSTAVAHFRSLSHSCSIVTKTYQGWEGVTVNTPFAGLLKNEEILCLADDLATRLTGVY--ATDN---- | |||||||||||||
8 | 3bwsA | 0.09 | 0.04 | 1.53 | 0.96 | CNFpred | -----FVETISIPEHNELWVSQMQ--------ANAVHVFDLKTLAYKATVDL-KWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKGKELYIAQFSASN-----ESGGGRLGIYSMDKE-KLIDTIGPPGNKRHIVSGN----ENKIYVSDM---CCSKIEVYDLKEKKVQK-DKPNTIALSPGKYLYVSCRGPNH-KGLVLGKVYVIDTT--TDTVKEFWEAG---------NQPTGLDVSP-DNRYLVISD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6eznG2 | 0.12 | 0.03 | 1.21 | 0.53 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIKS---------------------------------------------VHAV--------------------HSHADG----------------------TSYDEEPYKIKDKV-IYSVGFSEWNGEEWLPHIADD--IQFELRQVDPYYRLTLSPSG---------NDSETQYY-----TGEFDRHGVFTFLTDYKIGLSFTTDKDVKAIRHLANPREISNSWVISAICGVIVAWIFFVVSFVTTSS---- | |||||||||||||
10 | 3s6pA | 0.10 | 0.09 | 3.45 | 1.45 | Neff-PPAS | -----------ANISSMPEFRNWAKGKIDLDSDSIGYFKYLDPAGATESARAVGEYSKIPDGLVKFEIYNEECPVVTDVSVPLDGRQWSLSIFSFRTAYVAVANVENKVNDLIEWLNNLADWRYVVDSEQW--INFTNDTTYYVRIRVLRPTYDVPDPTEGLVRTVSDYRLTYKAITCEANM--------PTLVDQGFWIGGQYAL-TPTSLPQYDVSEAYALHTLTFARPSSAAALAFVWAGLPQGGTAPGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAGDTVTFRQVAVDEVVVTNNPAGGGSAPTFTVRVPPSNAYTNTVFRNTLLETRPSSRRLELPMPPADFGQTVANN---PKIEQSL-----------------LKETLGCYLVHSKMRNPVFQLTPASSFGAVSFNNPGYERTRDLPDYTGIRDSFDQNMSTAVAHFRSLSHSCSIVTKTYQGWEGVTVNTPFAGLLKNEEILCLADDLATRLTGVYPATDN----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |