Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MGQNWKRQQKLWNVPQLPFIRVPPSIYDTSLLKDLNQGQQRYFYSIMRIYNSRPQWEALQTRYIHSLQHQQLLGYITQREALSYALVLRDSTRRASAKIAPQRTIPRKTSA |
1 | 5cwcA1 | 0.12 | 0.10 | 3.51 | 0.77 | SPARKS-K | | KEELRERLVKICENAKRKG-------DDTEEAREAAREAFELVREAAERADSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGI----------- |
2 | 3hzsA2 | 0.18 | 0.09 | 2.95 | 0.63 | FFAS-3D | | -------------------------------MSHITVLQSAILASKVNAYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL----------------------- |
3 | 3dwkC3 | 0.15 | 0.11 | 3.65 | 0.29 | HHpred | | -----------------------KAAAKYYFNKDLNLAEEAYLAGLPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAK---KIDLKANLVNR-TPEERQNI--- |
4 | 5yfpH1 | 0.13 | 0.12 | 4.09 | 0.84 | MUSTER | | ---NSTSLRKMLANPHFNAKDVHDKLGNAS-AITI-DKFTSNLTDLSIQV-QEEVKLNINKSYNEIMTVNNDLNVAMRANINDLNEVLDQCTKIAEKRLQLQDQIDQER-- |
5 | 2ongA | 0.13 | 0.06 | 2.17 | 0.49 | CNFpred | | --------------------------------------VECYFWNTGIIEPHASARIMMGVNALITVIDDIYDVYGTLEELEQFTDLIRR--------------------- |
6 | 1vt4I | 0.11 | 0.11 | 3.91 | 0.78 | HHsearch-2 | | VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLALHRSIDHYNIPKTFDSNIEHPERLDFRFLEQKIRHDSGSILNTLQQLKFYKPYICDNDPKYERLVNALDFLP-KIEE |
7 | 5yfpH1 | 0.11 | 0.10 | 3.61 | 0.76 | Neff-PPAS | | ---NSTSLRKMLANPHFNAKDFVHDKLGNASAITI-DKFTSNLTDLSIQVQ-EEVKLNINKSYNEIMTVNNDLNVAMRANINDLNEVLDQCTKIAEKRLQLQDQIDQER-- |
8 | 3udfA1 | 0.19 | 0.15 | 4.95 | 0.56 | HHsearch | | AAENLSKEDILFLGKNAYGI---AAAAKIYYNKELSIAQMAMIAGLPKKYNPVVNPERALERRNWILGRMLQLGYISQAEYQKAVAE---P-----INLNMP--------- |
9 | 3dwkC3 | 0.20 | 0.17 | 5.50 | 0.79 | SP3 | | -------DNGQRHEH-VNLKDVPKSMKDADL-KDLNLAEEAYLAGLPQNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKK--IDLKANLVNRTPEERQNIDT--- |
10 | 6alyA | 0.10 | 0.08 | 2.97 | 0.49 | PROSPECTOR2 | | NNP---------LQQQSSQNTVPNVLNQINQI--FSPEEQRSLLQEAI-------------ETCKNFEKTQLGSTMTEPVKQSFNQKALRKIQALRDVKNNNNANNNGSNL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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