Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IPHRLKLRELLEQHCLKLRELLEQHCLKLRELLEQHCLKLRELLEQHCLKLRELLEQHCLKLRELLEQHCLKLRELLEQHCLKLRELL |
1 | 6ek9A | 0.15 | 0.15 | 4.99 | 1.06 | SPARKS-K | | MARCIEECLRCAQACTACADACLSECIRTDMDCADVCTATAAVLANVTRAVLQACATVCAACGDECARHCAEACRSCEQACQELLAGL |
2 | 5cwlA1 | 0.06 | 0.06 | 2.47 | 1.40 | SP3 | | ------TTEDERRELEKVARKAIEAAREGTDEVREQLQRALEIARESGTEAVKLALEVVARVAIEAARRGTDAVREALEVALEIARES |
3 | 5figA | 0.12 | 0.11 | 4.05 | 1.04 | SPARKS-K | | SEACIEACIDCMKACNHCFTKCLSGCIRLDRECADICALAVKAMQTFMKEICALCADICEACGTECCQACAKACFTCAEQCRSMAA-- |
4 | 1t1mC2 | 0.19 | 0.18 | 5.89 | 0.87 | FFAS-3D | | -PFIKEAKEKMKRTLEKIEDELRKWVKKAKEIVEEGKIAIRNIRREILKKIKEDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF- |
5 | 1m12A | 0.17 | 0.14 | 4.49 | 0.16 | HHpred | | --VCEFLVKEVTKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGS---SILSILLEE-----VSPELVCSML-----HLCSGLVP-- |
6 | 3s84A | 0.19 | 0.19 | 6.22 | 0.75 | MUSTER | | RPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRL |
7 | 5figA | 0.14 | 0.14 | 4.66 | 0.60 | CNFpred | | SEACIEACIDCMKACNHCFTKCLSGCIRLDRECADICALAVKAICALCADICEACGTECGKHDHDHCQACAKACFTCAEQCRSMAA-- |
8 | 1vt4I3 | 0.10 | 0.10 | 3.74 | 0.55 | HHsearch-2 | | LHRSINIPKTFDSD-DLIPPYLDQYFYSHIGHMTLFRMLDFRFLEQK-IRHDSTILNTLQQLKFYKPYICDNYERLVNAILDFLPKIE |
9 | 5cwlA1 | 0.06 | 0.06 | 2.47 | 0.94 | Neff-PPAS | | ------TTEDERRELEKVARKAIEAAREGTDEVREQLQRALEIARESTTEAVKLALEVVARVAIEAARRNTDAVREALEVALEIARES |
10 | 3j46n | 0.08 | 0.05 | 1.78 | 0.49 | HHsearch | | SPHSY---HSLPEGVKMTKEQKLAV-A----------------------AVAAQADLE-----LFSTPVWIS---QAQGI--R-AG-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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