Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VSIHIIADPGESQPLQEAIDKVLAWIHPDLQLFRVSERRAPRRRRKPSKVAQPALAVVLFLQEEYGEEPILQLHRTLQRPPWRHHHTERVPRRLLPYLPCSQDFFTLAPGTPLWAIRPVHYGKEIVRFTIYCRHDNYADILKFYELILRRSPSQKKTDFCIFPIFSNLDVDIQFSLKRLPCDQTPVPTDSSVLEFRVKDIGELVPLLPNPCSPISEGRWQTEDLDGNKILLQ |
1 | 4ro6A | 0.10 | 0.09 | 3.35 | 0.86 | SPARKS-K | | LHAVYRVG--DLDRTIKYYTECFFGPENTNFAVELTYNYGVDKYD-----IGTGFGHFAIANDD-----VYKLAENIKSK------GGKITREPGPVKGGSTVIAQDPDGYMFELIQRADTPEPLCQVMLRVG--DLERSIKFYEKALGMKLLRKKDKYTIAMLGYADTTVLELTYNYGVTEYSKGNA-YAQVAIGTNDVYKSAEAVLRQPGPLPGIIASFVDPDGWKVVLV |
2 | 5c4pA | 0.10 | 0.05 | 1.73 | 0.84 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------HMSRVQLALRVP--DLEASIGFYSKLFGTGPAKVRPGYANFAIAEPP---LKLVLIEGAGEDATRLDHLGVEVEDSAQVGHAARRLKLATVEENQDKVWVTGPGGEPWEV- |
3 | 4ro6A | 0.11 | 0.10 | 3.59 | 0.58 | HHpred | | -MLHAVYRVGDLDRTIKYYTECFGMK-----L--LRKRDVPDEKYGDKYDIGTGFGHFAIANDD-----VYKLAENIKSKGGKITREPGPV----K-GGSTVIAFAQDPDGYMFELIQRATPEPLCQVMLRVG--DLERSIKFYEKALGMKLLRKKYKYTIAMLGADKTTVLELTYNY-GVTEYSKGNAYAQVAIGTNDVYKSAEAVDLGGLPGINTIASFVDPDGWKVVLV |
4 | 4ro6A | 0.11 | 0.10 | 3.72 | 0.77 | MUSTER | | LHAVYRVG--DLDRTIKYYTECFDVPDEKYTNAFLGFGPENTNFYGVDKYDITGFGHFAIANDD-----VYKLAENIKS------KGGKITREPGPVKGGSTVIAFAQDGYMFELIQRADTPEPLCQVMLRVG--DLERSIKFYEKALGMKLLRKKDKYTIAMLGYAKTTVLELTYNYGVTEYSKGNA--AQVAIGTNDVYKSAEAVPGPLPGINTKIASFVDPDGWKVVLV |
5 | 4ro6A | 0.09 | 0.08 | 2.99 | 1.15 | CNFpred | | LHAVYRVG--DLDRTIKYYTECFGMKL-TNFAVELTYNYGVDKYD-----IGTGFGHFAIANDD-----VYKLAENIKSKGGKITREP------GPVKGGSTVIAFAQDDGYMFELIQRA-PEPLCQVMLRVG--DLERSIKFYEKALGMKLLRKKYKYTIAMLGYAKTTVLELTYNYGVTEYSKGN-AYAQVAIGTNDVYKSAEAVD-QPGPL-TKIASFVDPDGWKVVLV |
6 | 4nayA | 0.19 | 0.09 | 2.78 | 0.58 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------------------HHLKSINHICFSVR--NLNDSIHFYRDILLGKLLLTGKKTAYFELA---GLWIALNEEKDI-PRNEIHFSYTHIAFTIDEFKYWHQRLKDNNVNIL-QSIYFTDPDGHKLELH |
7 | 4ro6A | 0.10 | 0.09 | 3.47 | 0.92 | Neff-PPAS | | --MKLLRKRDVPDEKYTNAF-LGFGPENTNFAVELTYNYGVDKYD-----IGTGFGHFAIANDD-----VYKLAENIKSKGG------KITREPGPVKGGSTVIAFAQDGYMFELIQRADTPEPLCQVMLRVG--DLERSIKFYEKALGKKDVPDYKYTIAMLGYADEDKTTVLELTYNYGVTEYSKGNAAQVAIGTNDVYKSAEAVPGPLPGINTKIASFVDPDGWKVVLV |
8 | 2kjzA | 0.16 | 0.07 | 2.30 | 0.90 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------MTHPDFTILYVD--NPPASTQFYKALLGVDPVESSPTFSLFVLAN--GMKLGL--WSRH-TVEPKAGGGGELAFRVEQVDETFAGWKAGVAEFG-YTFTAADPDSHRLRV- |
9 | 5c4pA | 0.11 | 0.05 | 1.72 | 0.76 | SP3 | | -------------------------------------------------------------------------------------------------------------------------HMSRVQLALRVP--DLEASIGFYSKLFGTGPAKVRPGYANFAIAEPP---LKLVLIEGAGEDATRLD---HLGVEVEDSAQVGHAAGLATVEENQDKVWVTGPGGEPWEVY |
10 | 4huzA | 0.10 | 0.09 | 3.23 | 0.84 | PROSPECTOR2 | | TNITICTGT---------AQGDIDFFVKVMGQRFVKRTLFYDGSIPIDELGTPGTVMTTFPTRRTGQKGLEWWIGHLNAHGIATGEPGTRFGNDTRQPYDSPYVPIEHAQRGFHSW------------TASV--RELEDMDFFMENCWNFEKIGEEGNRHRYRVKGTTESGTIIDLLHEPDRRQGSWTIAEHGAFAVPDMDIQARIFTDFSDRKNRGYFESRTPGGVMFEIV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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