Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GHKVIARKEEDGFYYPGIVVKCPNSRHAIVDYHGNGRQLTPTRFVIPMGGARACPELRVGDFVLVKTTSEEDLECWVPGIVQMTPRRREAQLKFYTILQFDKKRVTSLRKGIMKIPKSRYVFACRYI |
1 | 2g3rA | 0.13 | 0.12 | 4.08 | 2.07 | SPARKS-K | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALSEDEY----FSAGVVKGHRKES--GELYYSIEKE-GQRKWYKRMAV-ILSLEQGNRLREQY |
2 | 2lvmA | 0.15 | 0.13 | 4.50 | 1.54 | FFAS-3D | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDIL------LCDPIPLDTEVTALSEDEY----FSAGVVKG--HRKESGELYYSIEK-EGQRKWYKRMAVI-LSLEQGNRLREQY |
3 | 2lvmA | 0.14 | 0.12 | 4.06 | 2.08 | HHpred | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTAL----SEDEYFSAGVVKGHRKE--SGELYYSIEK-EGQRKWYKRMAVI-LSLEQGNRLRE-- |
4 | 2g3rA | 0.15 | 0.13 | 4.50 | 2.18 | MUSTER | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALS----EDEYFSAGVVKGH--RKESGELYYSIEK--GQRKWYKRMA-VILSLEQGNRLREQY |
5 | 4criA | 0.12 | 0.11 | 3.86 | 2.40 | CNFpred | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLC------DPIPLDTEVTALSE----DEYFSAGVVKGHRKE---GELYYSIEKE-GQRKWYKRMAVILSL-EQGNRLREQY |
6 | 2lvmA | 0.13 | 0.12 | 4.08 | 1.19 | HHsearch-2 | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALSE----DEYFSAGVVKGHRKES--GELYYSIEK-EGQRKWYKRMAVI-LSLEQGNRLREQY |
7 | 2g3rA | 0.14 | 0.13 | 4.30 | 2.60 | Neff-PPAS | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALS----EDEYFSAGVVKGHRKES--GELYYSIEK-EGQRKWYKRMAVILSLEQGNRLREQYG |
8 | 2lvmA | 0.13 | 0.12 | 4.07 | 1.91 | HHsearch | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALSE----DEYFSAGVVKGHRKES--GELYYSIEK-EGQRKWYKRMAVI-LSLEQGNRLREQ- |
9 | 2g3rA | 0.13 | 0.12 | 4.09 | 1.16 | PROSPECTOR2 | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDIL------LCDPIPLDTEVTALSEDE----YFSAGVVKGHRKE--SGELYYSIEK-EGQRKWYKRMAVILSLEQGNREQYGLG |
10 | 2lvmA | 0.15 | 0.12 | 3.99 | 1.03 | SAM | | GLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILL------CDPIPLDTEVTALSE----DEYFSAGVVKGHRKES--GELYYSIEK-EGQRKWYKRMAVILS------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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