Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | FRSLPQKAFPCLEDRDVRDRLLKWSMQGRMTAQAFSFDQQFKPYQKDEFVMAFFNDQNVNSSLKLLSASGQWTTLGSRVTKIEATVVPCTEISMSFFDRLYSEGVVRETGDIVKCYDDYYDDILISDELRKVLLLEDSDHYDLFSQLDRKEFLFCLFKHLCIGGTLCQFEDVVGPYLETTKALYKDLVSVQKNPETKEISIISTVFRVSAYDDNGLCYPSSKSHEQTFAYLIVDPCKRHVHVLYH |
1 | 3ee1A2 | 0.16 | 0.13 | 4.33 | 0.68 | SPARKS-K | | FNLVHTITAPVSGNPEVIETAINC------CTSIIPNDDYFPVKDTD------FNSHDIYRDIRAS---------DSNSTKIYFIEIP-----LKLIADLINEGI-NEF-------IDSKKELQLSYNQLNKIINSNFPQQDLCFQTEKLLFTSLFISALTSA-----FWQSLHITSSSVEHIYAQIIKINAVVPGRAYEVSSSILKIETSYLHAGTLPSSEGLSRQVSFAIISPD--------- |
2 | 4dhiB | 0.11 | 0.09 | 3.13 | 0.55 | FFAS-3D | | ------AEYDNETSAAFLSKATE--LSEVYGIRYIRGDGNCFYRALVGLIEIMLKDRARLEKF------------------------------IASSRDWTR--TLVELGFPDWTCTDFCD--FFIEFLEKIHSGVHTEEATILNDDGSANYILMFFRLITS-AFLKQNSEEYAPFITVAQYCEQEIEPMWKDADHKAAGTRVRIEYMDRTAAPNGGIPSDDQQIAPEITLLYRP--GHYDVIY- |
3 | 2x0kA | 0.16 | 0.12 | 4.05 | 0.34 | HHpred | | FDPHPRRAPLGITTLAEFALAESFGID---GVLVIDFTRELSGTSPEKYVEFLLEDLHASHVVVGANTFGEN-----------------AAGTADSLRQICQSR-L----TVDVIDLLDDEGVRISTTVREFLSEGDVA--------RANWALGYVTGPVVRGGGLNYFHTVALPYAGWPEVAYAAAISVGTNPTFGDRSVESFV-----LDRDADLYGH------------------------- |
4 | 4dgkA | 0.11 | 0.10 | 3.69 | 0.62 | MUSTER | | YEDFDAGPTVITDPSAIEELFALAGKQELLPVYRLCWEKVFNDNDQTRLEAQIQQNPRDVEGYRFLDYSRAVFKEGYLGTV----PFLSFRDMLRAAPQLAKLQAWR-------SVYSKVASYIEDEHLRQAFSF-----HSLLVGGNPTSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGEVVLNARVSHMETT-KIEAVHLEDGRRFLTQNADSNSLFVLYFGLNDQLAHHTVCFG |
5 | 3rqtA | 0.11 | 0.07 | 2.51 | 0.67 | CNFpred | | --------------EQAKMLLAKDGYTHPLKIKLITYDG-------RPELSKIA--QVLQSDAKKA------------NIEIDIKSVD------DIEGYLKDR----SAWDATMYSFGTI--RGDTGYFFNQAYKKDGAINKDYNNSNVDDLINQLNHTV-------DVKERHNISNDIIKLSSRDVPNSYIA---YNDQIVAANSKVKNYK--------------------------------- |
6 | 2pffB | 0.14 | 0.13 | 4.59 | 0.67 | HHsearch-2 | | FNILPEEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQNDIHALAAKLLDTNYITARIMAKRNSALFRAVGEGNAQLVA-IFGGQGNTDDYFEELQTYHLVGDSELIRTTLDAE-KVFTQGLNILEWLENPSNDSWESFFQEQVQDYVNKTNSHLPAGKQVNGAKNLVQSLYGLNLTLRKAKAPS--GL--DQSRIP--FSERKKFSN--RFLPVSPFHPASDL-INKDLVKNNVSFNAK |
7 | 3ewkA | 0.07 | 0.05 | 2.21 | 0.67 | Neff-PPAS | | --------NSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKD------------------GTRYWVDSTIVPLMDNAGKPRQYISIRRDITAQKEAEAQLARLKQAMDANSEMILLTDRAGRIIYANPALCRFSGMA------------EGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHT------DGNGLVGYVQIQHD----------- |
8 | 1vsy3 | 0.19 | 0.04 | 1.45 | 0.37 | HHsearch | | ------------------------------------------------------------------------------------------------------------TSLLNERLQHYTLDYVDRAQHMKNIYDPSSRWFKTESHEDQAKYLCHVLVNLYIASSL------------------------------------------------------------------------------- |
9 | 3cphG | 0.12 | 0.11 | 3.93 | 0.81 | SP3 | | VTLYEKFKQNPISKEERESKFG--------KDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVEIEAISSPLMGIKFLEWISSYKEHQGLDLDKNTMDEVYYKFGLGNSTKEFIGLWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLMYGLGELPQGFARLSAIYDEVLYKKDTGKKSTGQRVIRAICILNH----PVPNTSNADSLQIIIPGRKSDIYVAIV |
10 | 1utea | 0.10 | 0.09 | 3.28 | 0.80 | PROSPECTOR2 | | WGGVPNAPFHTAREMANAKAIATTNFYFTG-------VHDAKDKRFQETFEDVFSDPSLVSAQIAYSKISKRWNFPSPYYRLRFK-------------------IPRSNVSVA---------IFMLDTVTLCGNFVSQQPERPRNLALARTQLAWIKKQLAAAKESIAEHGPTHCLVKQLLPLLTTNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNAENSLGGFAYVEITPKEMSVTYIEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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