Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IVLECGEGTGSRTFTSANDPAFQLAHVNIDITCLCNPMVNIEFSSIVSFEGSGDGRLRYELFRVCDNKEPTSLGIWVSERIGISFFDRTTNIFNFTFCDCITCPGCCDYLVIVTPIRISAELTATVSNARIAALA |
1 | 2zezC | 0.08 | 0.07 | 2.90 | 0.80 | SPARKS-K | | MDGWPDWGYPVSAAAYGGTKGFKLAGMGQKVA--LKPNTTYILGAWGKFTAKPGTYCDVIVQYHLKDANNTY--VQNILRFTETDWTYKQVVFTTPDAFGSDP------EFVLWKD-DASNADFYADNITLVE-- |
2 | 3wnkA2 | 0.16 | 0.13 | 4.42 | 0.63 | FFAS-3D | | -------SSGLVPRGSHMSGSGGIERVFTDKARYNGDAVSIRVQAKNGTGSSWSGAARLEIFH--------LENSVYTSSQSLSLTNGQSTTLTFTW--TAPSTDFRGYFVRIDAGTLGQATAIDVSS------- |
3 | 5k8gA4 | 0.17 | 0.10 | 3.42 | 0.26 | HHpred | | -----------------ADGSVTVVGVAVGAIVSSNES------VGHSIE-GQYGNLVLN-----------SDGSYVYDVTASVIPAGATESFAYLIQDQDGS--TSSANLSINVGTNTAS-------------- |
4 | 5n8pA | 0.11 | 0.11 | 4.00 | 0.77 | MUSTER | | TVASTGVTSGTTTVGANSAASGTVSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNTLTQADVTVTGNSSTTAVTVTQTAAATAGATVAGRVNGAVTITDSATAGKIATVTLGSFGAATIALTTVNLSGTGTSLGI |
5 | 1k5cA | 0.08 | 0.06 | 2.34 | 0.95 | CNFpred | | ---------------------VTIQNCIVKNQ---DDCIAINDGNNIRFENNQCSGHGISIGSIAT---GKHVSNVVIKGNTVT-----RSMYGVRIKAQRTATSASVSGVTYDANTI---SGIAKYGVLISQSY |
6 | 2pn5A | 0.07 | 0.07 | 2.99 | 0.48 | HHsearch-2 | | VITAKLYAGVFQIAPTPLGEGEELVSKTFEVKEYVLSTFDVQVMPSVIPL-EEHQAVNLTIEANYHFGKPVQGAKVELYLDDDELTVYGKGQVELRFDNFAMDADQQDVPVKVSFVEQTNRSQITVYRYALNAIK |
7 | 2gsyR1 | 0.12 | 0.11 | 3.95 | 0.93 | Neff-PPAS | | -TITAADDYQFSSQYQPGGVTITLFSANIDAITS------LSVGGELVFRTSVHGLVLGATIYLIGFDGTTVITRAVAANNGLTTGTDNLMPFNLVIPTNEITQTSIKLEIVTSKSGGQAGDQMSWSARGSLAVT |
8 | 5k8gA2 | 0.10 | 0.06 | 2.21 | 0.39 | HHsearch | | ---------LSAEANFSEGQQHVLTNLPEGFGFP-DGT------TEVV-T-NFGGTITL-----------GDDGEYRYDAPVRGDAVSDKDSVTVTLEDGR------TFTVNLDIQ-----------DS------ |
9 | 3wnkA2 | 0.14 | 0.12 | 4.04 | 0.93 | SP3 | | ------HSSGLVPRGSHMSGSGGIERVFTDKARY-NPGDAVSIRVQAKNGTGSSWSGAARLEIFHLE---NSVYTSSQSL-SLTNGQSTTLTFTWTAPSTDF----RGYFVRIDAGTLGQGTAIDVSS------- |
10 | 3ideA2 | 0.08 | 0.08 | 3.18 | 0.64 | PROSPECTOR2 | | RY-EIDLPSQRLPPVPATGTLTTLYEGNADIV--NSTTVTGDINFSLAEQPADETKFDFQLDFMGLDNDVPVVTVVSSVLATNDNYRGVSAKMTQSIPTENITKPITRVKLSYKINQIGNVATLGTMGPASVSFS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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