>PF14817 (645 residues) VQELKRWATEEFNLPPDSLPNDSYCKTLCVGTGKSIWKYVIQHVFQQRNVRIMRGNLQWY KVLQDKEVKQTEGQSEAAKRRELQRKIDQLRAEISHLDSQISGTEEQVATQEQSVGRTWS EVEDSQRRELLLQAFRQRCISGRKVLADDSQKISEHCQTLEEMARKAETEVLFDGKPSRS TDDDSINSKAAAEAQVLREVRALCDDRVHFYQSLQEGELKTQHSAAKRMSREQRTAVFQY WLSAVENVLDSYPPNHVLSALQYLASREQKELEEKVASLDVTRDVTALRFRYESNHLLDV SAEEDHELPPVKALLEAAWEEVEQSLVELAQTRSRVQQLKTQLQARKKEAEQEVSGIGDE LHNDSVALSALEVELQCVMQAAARDHIRDRCIQLDQDARSRQEALRNLRSQWQSILDFRQ LVVLRQEDIRGLIKGNSTAKTQLIRLHRELQEFIQSELVPQFGDVIAAANSLRNSISKEA RQLGTVSLLSLDRRTIDGTQRIPASWLSIHRLQSPTFKGLCQSLTFPLYKAPEELCSRSR SQQLELRFLHQLLQLHSAALQKTKKEAEQLHASDQKALLTRVREEDQKLLKALVPRVRCL TQRCAQGLSYGDQVKTAISYWWDKPAQHVLPEVQKGGLTFQQWLQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VQELKRWATEEFNLPPDSLPNDSYCKTLCVGTGKSIWKYVIQHVFQQRNVRIMRGNLQWYKVLQDKEVKQTEGQSEAAKRRELQRKIDQLRAEISHLDSQISGTEEQVATQEQSVGRTWSEVEDSQRRELLLQAFRQRCISGRKVLADDSQKISEHCQTLEEMARKAETEVLFDGKPSRSTDDDSINSKAAAEAQVLREVRALCDDRVHFYQSLQEGELKTQHSAAKRMSREQRTAVFQYWLSAVENVLDSYPPNHVLSALQYLASREQKELEEKVASLDVTRDVTALRFRYESNHLLDVSAEEDHELPPVKALLEAAWEEVEQSLVELAQTRSRVQQLKTQLQARKKEAEQEVSGIGDELHNDSVALSALEVELQCVMQAAARDHIRDRCIQLDQDARSRQEALRNLRSQWQSILDFRQLVVLRQEDIRGLIKGNSTAKTQLIRLHRELQEFIQSELVPQFGDVIAAANSLRNSISKEARQLGTVSLLSLDRRTIDGTQRIPASWLSIHRLQSPTFKGLCQSLTFPLYKAPEELCSRSRSQQLELRFLHQLLQLHSAALQKTKKEAEQLHASDQKALLTRVREEDQKLLKALVPRVRCLTQRCAQGLSYGDQVKTAISYWWDKPAQHVLPEVQKGGLTFQQWLQ | |||||||||||||||||||
1 | 1st6A | 0.09 | 0.09 | 3.26 | 1.33 | SPARKS-K | VENACTKLVRAAQMLQADPYSVDYLIDGSRGILSGTSDLLLTFDEARKIIRVCKGILEYLTVAE----VVETMEDLVTYTKNLGPGMTKMAKMIDERQQELQEHRVMLVNSMNTVKEIFVTTKNLKNRNFTVEKMSAEINEIIRVLSKDTEAMKRALALIDSKM---NQAKGWLRDPNAPPGDAG----EQAIRQILDEAGKAGEGTCKTLGQMTDQLADLRAR--GQGATPMAMQKAQQVSQGLDLLTAKVEKLEAMTNSKQAIAKKIDAAQNWLADPNGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDVGQAAIRGLVAEGRRLANVMM--GPYRQDLLAKCDRVDQLAAQLAQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATVFEERAANFENHAARLATAEKAAAVGTANKTTVQATVKSARELTPQVVSAARILRNPMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAGATSIARRANRILLVAKREVENFREAVKAASDELSKTISPMVMDAKA------------VAGNISDPGLQKSFLD | |||||||||||||
2 | 4iggA | 0.10 | 0.09 | 3.29 | 2.29 | FFAS-3D | VEDVRKQAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLVYKL--LVQLKVVEDGILKLRNAGN--------------EQDLGIQYKALKPEVDKLNIMAAKRQQELVGHRDQMAAARGILQKN--VPILYTASQACLQAYKANRDLIYKQLQQAVTGISNAAQATASDDASQHQGGGPLSFSEERFRPSLEERLRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSLLVLIEAAKKEVKEYAQV--FREHANKL---IEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALTAGAIRGRAARVIHVVTSEMVYTEKVLEATKLLSNMPRFTEQVEAAVEALENEFIDASRLVYDGIRDIRKAVLMIRTPGKAKIAEQVASFQSKLDAEVSKWDDSGNDII----------------VLAKQMCMIMMEMTDFTRGKPLKNTSDVISAAKKIAEAGSRMDKLGRTCKQDLLAYLQRIAL-----YCHQLNICSKSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQNLP---AVSW------------- | |||||||||||||
3 | 6ianC | 0.13 | 0.07 | 2.31 | 0.34 | HHpred | -AS-LEFLTKTLGYRV-L--ADSFPTSFSRAEIYPTLYWVLSN-QQNEK----RVYLARFLQRLE--IPEAQDEALYQQYVNLRRRVDALRTAPADARRAVTVLEEECDRLRGYIQVAEKKLAGVPDKEALLNA-CKSLRAALEEESRLAEKGVELQQQLISSRQRSTEHNRLQNLRRDAA---D-GRVDVI----VRRLRDEIQ---------------TNKIIEEQLPKELQ--QKQRENAEFDRLISEPLD----QALTTENQQLDEALKKLHQQVK----E-----RQK------PG---EDGSATIKQRVAKRKVEV-E---QLTGLQADNSRTLNDIRERENRIEQLREAHHLK--DD--------------DFREFSKQVLAKKAATES-----RTHLSEQRVEYG-VLNF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 1st6A | 0.10 | 0.10 | 3.63 | 1.41 | MUSTER | VENACTKLVRAAQMLQADPYSVPARDYLIDG-LSGTSDLLLTFDEAIRVCKGILEYLTVAEVVETMETHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAEINEIIRVLDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQARQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHSPEARALAKQIATSLQNLQSKTNRAVANPVKAAVHLEGKIEQAQRWIDNGVGQAAIRGLVAEGRRLANVGPYRQDLLAKCDRVDQLAAQLADLAPQARAIAAQLQDSLKDLKARMQEATTPIKLLAVAATAPREEVFEERAANFENHAARLGATAEKAAVGTANKTTVEGIQAVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSPKFREAVKAASDELSKTISPMVMDAKAVAGN--ISDPGLQKSFLD | |||||||||||||
5 | 1tr2A | 0.10 | 0.10 | 3.57 | 1.44 | CNFpred | LVQAAQMLQSDPYSVPARDYLIDGSRGILSGT--SDLLLTFDEAEVRKIIRVCKGILEYLTVAEVV-----------ETMEDLVTYTKNLGPGMTKMAKMIDERQQELQEHRVMLVNSMNTVK--ELLPVLISAMKIFIEEALKNRNFTVEKMSAEINEIIRVLQLT-----------SWDEDAWASKDTEAMKRALASIDSKLNQAKGWGEQAIRQILDEAGKVGELCAGKERREILKMLGQMTDQVADL-KAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKIDAAQNWLADPNGGPEGE---EQIRGALAEA-----RKIAELCDDPKERDDILRSLGEISALTSKLADLKGDSPEARALAKQVATALQNLQTKTNR-VHLEGKIEQAQRWIDNRGVGQAAIRGLVAEGHRLANMMGPYRQDLLAKCDRVDQLTAQLADLAARG-PQARALASQLQDSLKDLKARMQEAMTQEVSDVFTTPIKLLAVA-APNREEVFDERAANFENHSGKLGATAEKAAAVG-TANKSTVEGIQASVKTARELTPQVVSAARILYEHFETMKNQWIDNVEKMTGLVDEDTKSLLDASEEAIKKDLDKCKVAMA-LVAGATSIARRANRILLVAKREVE--NSEDPKFRE | |||||||||||||
6 | 6f1tX2 | 0.16 | 0.03 | 0.87 | 0.47 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQG----------TVEELQDRVLILERQGHDKDLQLHQSQLELQEVR----------------LSYRQLQGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 5lj3T | 0.05 | 0.05 | 2.24 | 2.47 | Neff-PPAS | --------------------EDVAFEYEIQKTNILTWKRYIEYWKDKQIRWLYERFCSQFV----------TDTSIWEDYIRWESETSRIFWLFQRCLKSCVR-DCDRICLSYLELAIEMIRHALASSLMKMEMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARKLWTQSLKVPYPYIEDLEEIYLNWADRELDHVPTNPEILLSLRIWSKYIDYLEAYIFNKTKMAYNTVIDLRPAMAENFALFLQNYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSH-------PEHIRFLFEKALKNLCSNGID-----CKTIFIAYSVFEERSKSIEILRRGAVI--------GLESRLQLWRMCISKAESVTRELYQECIQILEFVIKFSDFESRAREILAYGAKL-----------NTELWDSFEI | |||||||||||||
8 | 6f1tX2 | 0.11 | 0.02 | 0.84 | 0.80 | HHsearch | --------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEEN-------DLLQGTVEELQDRVLILERQGHDKDLQLQEVRLSYRQLQGGGGGGGG-------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---G---GGGGGGGGGGGGGG-GG--GGGG-------------GG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2bkuB | 0.09 | 0.08 | 3.17 | 1.84 | PROSPECTOR2 | MAEFAQLLENSILSPDQNIRLTTQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTAAVRLAALNKNNMEREGERNYLMQVVCEAEVQAAAFGCLCKIMSKYYTFMKPYMEQWSTICEEEIDIAYELAQFPQSPLQSYTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKQLAEATPSPIYNFYPALVDGNEFNARASAFSALTTDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLE----------TFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRENIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEALDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVDWVIDYIKRTQATKDTARWAREQQK---------------------RQLSL | |||||||||||||
10 | 3c4wB | 0.16 | 0.03 | 0.87 | 0.16 | SAM | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT-------LYEMIAARGPFRARENKELKQRVLEQAVTYPDKFSPASKDFCEAL----------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |