Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | PLKISTENFGKLWLSFANDVKQNVKVSESQAALSSALKTLQQKLRLHVVEIIGNEGLLACQLLPSIPCLLHFRVHGDVLALWFRSSCSSLPDYLLYQCQK |
1 | 2iv9A2 | 0.13 | 0.13 | 4.50 | 1.70 | SPARKS-K | | DGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNN-NVYTIAKRNVMLYQSLKLTNGIWILAELRIQPPNYTLSLKCRAPEVSQYIYQVYDS |
2 | 1pzdA2 | 0.20 | 0.19 | 6.09 | 1.20 | FFAS-3D | | --KVMKLNFEAAWDEVGDEFQKEETFTSTIKTLEEAVGNIVKFLGMHPCERSDKVLLLAGVFRGGHDILVRSRLLLLTMQVTARSSEELPVDIVLASV-- |
3 | 2iv9A | 0.12 | 0.12 | 4.21 | 0.73 | HHpred | | DGKMERQVFLATWKDIPNELQFQIKEC-H-LNADTVSSK-LQNNNVYTIAKRNVMLYQSLKLTNGIWILAELRIQPGNYTLSLKCRAPEVSQYIYQVYDS |
4 | 2iv9A2 | 0.13 | 0.13 | 4.49 | 1.46 | MUSTER | | E-KMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNN-NVYTIAKRNVMLYQSLKLTNGIWILAELRIQNPNYTLSLKCRAPEVSQYIYQVYDS |
5 | 1w80A | 0.16 | 0.16 | 5.29 | 1.17 | CNFpred | | PTEMASQDFFQRWKQLSQEVQNIFKAKHP--MDTEITKAKIIGFGSALLEEV-ANFVGAGIIHTQIGCLLRLEPNAQMYRLTLRTSKDTVSQRLCELLSE |
6 | 1qtpA | 0.17 | 0.16 | 5.28 | 1.39 | HHsearch-2 | | PTE-ASQDFFQRWKQLSNPVQNIFKAK--HPDTEITKA-KIIGFGSALLEEVDANFVGAGIIHTQIGCLLRLEPNLQQYRLTLRTSKDTVSQRLCELLSE |
7 | 2iv9A2 | 0.13 | 0.13 | 4.48 | 1.57 | Neff-PPAS | | --KMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNN-NVYTIAKRNVMLYQSLKLTNGIWILAELRIQNPNYTLSLKCRAPEVSQYIYQVYDS |
8 | 1qtpA | 0.17 | 0.16 | 5.27 | 2.18 | HHsearch | | PTE-ASQDFFQRWKQLSNPVQNIFKAK--HPDTEITKA-KIIGFGSALLEEVDANFVGAGIIHTQIGCLLRLEPNLQQYRLTLRTSKDTVSQRLCELLS- |
9 | 1kyfa2 | 0.16 | 0.16 | 5.30 | 0.67 | PROSPECTOR2 | | PTEMASQDFFQRWKQLSNEVQNIFKAKHPMD--TEITKAKIIGFGSALLEEVDPNFVGAGIIHTKTGCLLRLEPNLQMYRLTLRTSKDTVSQRLCELLSE |
10 | 1qtpA | 0.15 | 0.14 | 4.73 | 0.55 | SAM | | PTE-ASQDFFQRWKQLSNPQEVQNIFKAKHP-DTEITKAKIIGFGSALLEEVDPANFVGAGII-QIGCLLRLEPNLQQYRLTLRTSKDTVSQRLCELL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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