Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EAVDLLLDLDDVPSVAVSPFLKPGETLTPSLLSSGSTSEKTSTMQLTVTAPAHVPTRTHELLNRMAGAGLSVSYRFTRGENIYSASMVTVELTLTNHSDNDIKKISLSQKKSSPGMELKSFPEIECLAVGELRSATIGIDYADTTQ |
1 | 2iv9A | 0.16 | 0.10 | 3.41 | 1.06 | SPARKS-K | | ------------------------------------------------MAPGGYVAPKAVWLPAVKAKGLEISGTFTHRQ-----GHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPTPLAIHTPLMPNQSIDVSLPLNTLGPVM |
2 | 2iv9A | 0.17 | 0.11 | 3.60 | 1.28 | FFAS-3D | | ------------------------------------------------MAPGGYVAPKAVWLPAVKAKGLEISGTFTHRQG-----HIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAITPLMPNQSIDVSLPLNTLGPVM |
3 | 2iv9A | 0.14 | 0.09 | 3.04 | 1.02 | HHpred | | -----------------------------------------------MAPGGY-VAPKAVWLPAVKAKGLEISGTFTHRQ-----GHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTLAIHTPLMPNQSIDVSLPLNTLGPVM |
4 | 2iv9A1 | 0.17 | 0.11 | 3.60 | 1.00 | MUSTER | | ------------------------------------------------MAPGGYVAPKAVWLPAVKAKGLEISGTFTHR-----QGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAITPLMPNQSIDVSLPLNTLGPVM |
5 | 1e42A | 0.16 | 0.09 | 2.97 | 1.23 | CNFpred | | ----------------------------------------------------------AVWLPAVKAKGLEISGTFTHR-----QGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSPLAIHTPLMPNQSIDVSLPLNTLGPVM |
6 | 2iv9A | 0.15 | 0.10 | 3.23 | 2.21 | HHsearch-2 | | -----------------------------------------------MAPGGYVA-PKAVWLPAVKAKGLEISGTFTHRQ-----GHIYMEMNFTNKALQHMTDFAIQFNKNSFGVISTPLAIHTPLMPNQSIDVSLPLNTLGPVM |
7 | 2iv9A1 | 0.17 | 0.11 | 3.59 | 1.23 | Neff-PPAS | | -------------------------------------------------APGGYVAPKAVWLPAVKAKGLEISGTFTHRQG-----HIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAITPLMPNQSIDVSLPLNTLGPVM |
8 | 2iv9A | 0.15 | 0.10 | 3.22 | 2.68 | HHsearch | | -----------------------------------------------MAPGGYVA-PKAVWLPAVKAKGLEISGTFTHRQ-----GHIYMEMNFTNKALQHMTDFAIQFNKNSFGVISTPLAIHTPLMPNQSIDVSLPLNTLGPV- |
9 | 4qnlA3 | 0.09 | 0.09 | 3.40 | 0.64 | PROSPECTOR2 | | GVKVRLSKEPNTRPAPVKQSNANDYGVFGEVLSGTQFSLYNGASVGYLAVPRGLKKNTYIALNYNPLTNVGVLVGVVFGDTTREDKGFKVWEYTSSSTGAHTFTVESDDGTATTSAFSTTVATSGYVPSASSQLFTLEYSTIGNVH |
10 | 2iv9A | 0.17 | 0.10 | 3.39 | 0.73 | SAM | | -------------------------------------------------APGGYVAPKAVWLPAVKAKGLEISGTFTHRQ-----GHIYMEMNFTNKALQHMTDFAIQFNKNSFGVISTPLAIHTPLMPNQSIDVSLPLNTLGP-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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