>PF14782 (441 residues) TGEVIFKDNFASSIAGVVEGDYRMDGNTQLICCSVDGEVRGYLPGSQEMKGNLMDTSVEQ DLIRELSQKKQNLLLELRNYEENSKQAELSAQVNEADGQRGVIPANTQLQTALSVNLGSD SQAAHVELCISTSNDTMIRAVLIFAEGIFEGESHVVHPSLQNLSGRIQVPLTPPKDVPVD LHIKAFVGYRSSTQFHVFELTRQLPRFSMYALSSPDSAPEPLSFVNFTISERVQRVVMWL NQSFLLPEDAELQSAPFQVCFTSLRDAGQLCIKIKPNGEISISTDDIDLAGDIIQSMASF LAIEDLQVEADFPAYFEELRKVLVKVDEFHTVHQKLTADMADHSNLIRSMLVRAEDSRLM GDMRNMKKRYMELYDLNRDLLNEYKIRCTNHTELLNNLKSVNQAIQRAGQLRVGKPKTQV ITACRDAIRNNNLNMLFRIMR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TGEVIFKDNFASSIAGVVEGDYRMDGNTQLICCSVDGEVRGYLPGSQEMKGNLMDTSVEQDLIRELSQKKQNLLLELRNYEENSKQAELSAQVNEADGQRGVIPANTQLQTALSVNLGSDSQAAHVELCISTSNDTMIRAVLIFAEGIFEGESHVVHPSLQNLSGRIQVPLTPPKDVPVDLHIKAFVGYRSSTQFHVFELTRQLPRFSMYALSSPDSAPEPLSFVNFTISERVQRVVMWLNQSFLLPEDAELQSAPFQVCFTSLRDAGQLCIKIKPNGEISISTDDIDLAGDIIQSMASFLAIEDLQVEADFPAYFEELRKVLVKVDEFHTVHQKLTADMADHSNLIRSMLVRAEDSRLMGDMRNMKKRYMELYDLNRDLLNEYKIRCTNHTELLNNLKSVNQAIQRAGQLRVGKPKTQVITACRDAIRNNNLNMLFRIMR | |||||||||||||||||||
1 | 5oqlA | 0.12 | 0.11 | 3.78 | 1.29 | SP3 | SGFCIVTFTEHTS--GVTACEFAKKGS-VLFTASLDGSVRAWDLIRYRNFRTFTAPERLS--FTCMA------------VDPSGEVVQTGQLLDRLSGHEGPVPDGSVLVSGSTARIWSIFSRTQTSEPLQLQSD--VLDVAFRPDSVSEAQQVSGVSGGRRITDRRTAANVAGTKNFNTIRYTCLLAGGNSKYICLYSLLKKFTVSVNLSLSGTQEFLNSKLMTEAGPSDLEDRIDRSLPGSKRGDPGARKKFPEVRVSGVAFSPTGNSFCAASTEGLLVYSLDNMEITPASTLAVLEKEKYLKALVMAFRLNEAGLITRVYQAITDIGLVVEQFTVYVPRLLRFVAAQTEQS------PHMEFCLLWIRALIDKHGPWLAANR------GKVDVELRVVARAVAKMRD-EIRRLADENVYMVDYLLNQ----------- | |||||||||||||
2 | 1rh1A | 0.12 | 0.10 | 3.63 | 1.16 | PROSPECTOR2 | TMVVWPSTGRIPGSMPPGWGDYSPQGIALVQSVLFPGIIRRIILDKELEEGDWSHSPWGNEKVSAARTVLENGL-----------------------RGGLPEPSRPAAVSFARLEPASGNEQKIIRLMVTPAAGNNVPVKYRLTDLMQNGTQYMAI--------IGGIPM----TVPVVDAVPVPDRSRPGTNIKDVYSAPVSPNLPDLVLMNTPVRSNPEIQEDGVISETGNYVE--------AGYTMSSNNHDVIVRFPEGSGVSPLYISAVEILDSNSLSQRQEAENNAKDDFRVK------------KEQENDEKTVLTKTSEVISVGDKVGEYLGDKYKALSREI--AENINNIRSYDDAMSSINKLATDKEAIVNAWKAYAIKANNIREKSIEGYLEVESWVISGMASAVALSLFSLTLGSALIAVDELNHKII | |||||||||||||
3 | 6bzaA | 0.11 | 0.10 | 3.47 | 0.81 | SPARKS-K | --NQYDVIIIGSGIAGALTGVLAKSGLNVLILD--------------SAQHPRFSVGESGFLLRLLSKRFD-----IPEIAYLSHPDKIIQHVGSS------ACGIKLGFSFAWHQENAPSSPDHLVAPPLKVPEAHLFRIESISLN--DDGVEVALSNAAPVKAAFIIDLRTTEGLATDTCSFFTHMLNELFKSTLHHIFE-EGWLWVIPFNNHPQGTNQLCSIGFQFNEAPEIEFRKLLKKYPAIKDAVNARE--------WIYAPRINYRSVQDRFCLLFIDPFESILRLAPKVLDAARSNRWQ-----REQFIEVERHCLNAVATNDQLVSCSYEAFSDF-HLWNVWHRVWLSGSNLGSAFLQKLLHDLEHSARQFDAALECLSLDSPAYESLFRQSCQVMQQAREQA--RPVAETANALHELIKEHEAELLPLGYS | |||||||||||||
4 | 5n77A | 0.07 | 0.03 | 1.44 | 0.96 | FFAS-3D | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLSAFQLE-----NNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQSELGQSARFFEDDDGLHIHSFFFFEDATVAFTIRDGRLFTLRERELPAFRLYRMRA------RSQSMVDGNAYELTKIEQLADEIENIYSDLEQLSRVIMEGHDEYDEALSTLAELEDI--GWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESL------FQKVNFLMQAAMGFINIEQNRIIK | |||||||||||||
5 | 4onsA | 0.18 | 0.06 | 2.07 | 0.32 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEELVAAVEDVRKQGETMRIASSEFADDP-CSSVKRGTMVRAARALLSAV-----TRLLILADMADVMRIVEEALEAVKN---A-NEQDLANRFKEFGKEMVKLNYVAARRQQHCDEARGALKKNATMLYTASQAFLRHPDVAATRANRDYVFKQVQEAIAGISS | |||||||||||||
6 | 6bzaA | 0.11 | 0.10 | 3.46 | 0.77 | MUSTER | -------------------------NQYDVIII---GNVLIL-AQHPRFSVGEAATPESGFLLRLLSKRFIPEIAYLSHPDKIIQHVGSSQENAPSSPDHLVAPPLKVPEAHLESRQNIKLNDDGVEVALS-NAAPVKAAFIIDAAGLLATDTCSFFTHMLNVKSYEDALAPLSRRSPIELFKSTLHHIFEEGWLWVIPFNGTNQLCSIGFQFNNAKYRPTEAP-----EIEFRKLLKKYPAIGEHFKDAVNARE-----WIYAPRINYRSVQNVGDRFCLLFID-FESILRLAPKVLDAARSNRWQ-----REQFIEVERHCLNAVATNDQLVSCSYEAFSDFHLWNVWHRVWLSGSNLGSAFLQKLLHDLEHSDARQFDAALEAVSLDSPAYESLFRQSCQVMQQARE--QARPVAETANALHELIKEHEAEL-LGYSR | |||||||||||||
7 | 4ui9I | 0.12 | 0.09 | 3.28 | 0.77 | CNFpred | ------------EIIFLVWSPK----RDLIALANTAGEVLLHRLA------------------------------------------------------------SFHRVWSFPPNE---NTGKEVTCLAWRPDGKLLAFALADT-----KKIVLCDVE----KPESLHSFSVE-APVSCMHWMEVTVESVLTSFYEDESNLLLPKLPTLPKNYSNTSKI-RLNILVLGGS--GFIELYAYGMFKIARVTGI--AGTCLALCLSSDLKSLSVVTEVVSYFQLETNLLYSFLPEVTRMARKFTISALLINLSLTCMCEAWEEILMQMDSRLTKFVSVQDEFMHLSAELQTLLMNQLTVKGLKLGQSIESSYSSIQKLVISHLQS---GSESLLYHLSELKGMASWKQKYEPLGLD---AAGIEEAITAVGSLKANELLQVID | |||||||||||||
8 | 1vt4I3 | 0.12 | 0.04 | 1.27 | 0.40 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYALHRSIVDHIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTQKIRHDSTAW-NAS---------GSILNTLQQLKFYKP--------------YICDNDPKYERL---VNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK | |||||||||||||
9 | 6frlA | 0.10 | 0.08 | 3.15 | 0.94 | Neff-PPAS | RDDDVMRATQATCKLGIRFLDWSGPGSDFIHPFGLYG-------------QDVKGIGFHHYWLKQRRAGDAAPLAAYSLGAALAAGGKFTLPSPHPPSQLSVFDGGCARIDARIRSVELRPEDGFVRALTLDDGREVEGDLFVDCSGFK---GLVIGEALGVG------FEDWGRWLPCDAAYAVQSENRPGDAPAPFTRVTARSAGWQWGIPLRH--RAGNGLVFSSAHLSDDQALAELMPHLLGDPLTEPRRIPFRPGRRS-----------------QAWAKNIALIETGIERLKALFPDRRFA-----QPILDEFNDQTAREMERVRDFIILHYKLNRRTDT-----DFWRDCREMPVPETLERKIALWTARGQFVRYRWEMFPASWLAIYDGFGLYPDHHDPAVDAMDPAYLARSLAEMRANIADLHAQFLAGL-- | |||||||||||||
10 | 6f1tX2 | 0.09 | 0.02 | 0.94 | 0.43 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSAT---------LEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |