>PF14688 (304 residues) NLLSWIKTNSKISRKKSQESRDYSKDVKEITGRLKKMVGVRAIGWHTNWGPRRFTACLTS LEKVSENHPIVVKKFLFGRNVVFTDRNGVSLSGEVCLNHTDVPQVWLMRLSSVPAYDAVI ERLPYMEQELSRLLCHIKIRRRERHHIVMAEEYEVLLNKILNTMRRNQDLVRRMFRSGDL SRLEMVVEGSSAPLTLTNLGQYLIPVSMPGSMIVDFIAKTQQQAEERLKDAISLKMIEDE VIQQCQDKLGLIHLEKDLNISPAQMTQCCERLMDNADEITTYMEGVRVRVTQYYSVTDDG TLRI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | NLLSWIKTNSKISRKKSQESRDYSKDVKEITGRLKKMVGVRAIGWHTNWGPRRFTACLTSLEKVSENHPIVVKKFLFGRNVVFTDRNGVSLSGEVCLNHTDVPQVWLMRLSSVPAYDAVIERLPYMEQELSRLLCHIKIRRRERHHIVMAEEYEVLLNKILNTMRRNQDLVRRMFRSGDLSRLEMVVEGSSAPLTLTNLGQYLIPVSMPGSMIVDFIAKTQQQAEERLKDAISLKMIEDEVIQQCQDKLGLIHLEKDLNISPAQMTQCCERLMDNADEITTYMEGVRVRVTQYYSVTDDGTLRI | |||||||||||||||||||
1 | 5k7vA | 0.07 | 0.06 | 2.29 | 0.61 | SPARKS-K | MIDILAESSKKSIEELARAAKAVAEAIEEIARLATAAIQLA--------SEEFMARAISAIAELAKKAIEAIYRLADNH----TTDTFMAAIAAIANLAVTAILAIAALASNHTTEEFMARAISAIAELAKKAIEAIRLADNHTTDAAAIEAIALLATLAILAIALLASN-----------------------------------HTTEISAIAELAKKAIEAIYRLATYIEKAIEAIEKIARKAIKAIELAKN-----ITKEKAKSAIDEIREKAKEAIKRLEDNRT---------------- | |||||||||||||
2 | 1cunA | 0.12 | 0.07 | 2.56 | 1.07 | FFAS-3D | DEESWIKEKKLLVSSELTGVQNLRKKHKRLEAELAAH-------------EPAIQSVLDTGKKLSDDNTEEIQQRL-----------------------AQFVDHWKEL----------KQLAAARGQRLEESL--------------EYQQFVANVEEEEAWINEKMTLVASEDYGDTLA---------------------------AIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKNITAKM-------------KGLKGKVSDLEKAAAQRKAKLD-------------------- | |||||||||||||
3 | 3qaeA1 | 0.16 | 0.04 | 1.42 | 0.28 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIGQVALYQVANPKLAQEKIASKKAELLELANQAYPS---------IVKRGGGARDLHVDEAMGANMLNTMLEALKPVLEELS---QG-QSLMG------------- | |||||||||||||
4 | 1st6A | 0.12 | 0.11 | 3.97 | 0.74 | MUSTER | AIRQILDEAGKAGEKERREILGTCKTLGQMTDQLADLRAAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEE-PKERDDILRSLGEISALTAKLSDLRRHGKGDSLAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGV--------GQAAIRGLVAEGRRLANVMM--GPYRQDLLAKCDRVDQLAALADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTEVSDVFSDTTT---PI | |||||||||||||
5 | 1hciA | 0.06 | 0.05 | 2.11 | 0.68 | CNFpred | GYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLHQDRVEQIAAIAQELNELDYHDA-VNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLH----------------LEFAKRAAPFNNWMEGAME-------------------------------DLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRIS-TVTMDELRTKWDKVKQLVPIRDQSLQ-------------------- | |||||||||||||
6 | 1vt4I | 0.13 | 0.12 | 4.33 | 0.35 | HHsearch-2 | VLRIFLMSPYIEQRDRLLELRPAWVALDVCLSYKVQKMDFKI-FWLNLKNCNSPETVLEMLQKLLKSKPYENAFNLSCKILLTTRFKQVATTTHISLDHHSTPDEVKSLLLKLDLPREVLRRLSIIAEKLTTILDRLSVFPPSA-HIPTILLSLIWFDVMVNKLHKY--S--LVE--KQPKESTIKVENEYAHYNIPDSDDLIPPYLDQYFY-SHIGHHLKNIHPERMTLFR--MVFL-DFRFLEQKIRHDSTAWNASGSNTLQQLKFYPYICDNDPAILDFLPEN-LICSKYTDMAED--EAI | |||||||||||||
7 | 2yfaA | 0.10 | 0.08 | 2.90 | 0.86 | Neff-PPAS | -------------GSHMGDIGQLNKDLTDLRIARLQYMIANG----DDTAAANTLAKLDAFSKQQAYLATTFK-----------SPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENS------------------------SANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER------------------ | |||||||||||||
8 | 2mukX | 0.14 | 0.04 | 1.35 | 0.50 | HHsearch | --------------------------------GGPEAAGLRKIDLRMYKSYDELSNALSNMFSSFTKHGERLMDLVWDYVPS-----YENKDGNWMLV-GDVP--WPMFVDTCKRLR---------------------LMKGSD--AIGL---------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4tqlA | 0.11 | 0.08 | 2.96 | 0.65 | SP3 | --YKQMVQELEKARDRMEKLKEMVELIQKAIELMRKIF--QEV-------KQEVEKAIEEMKKLYDEAKKKIEQMIQ------------------QIKQGGDKQKMEELLKRAEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNI-----------------------DDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKA--KQV-------AEELIKKILQLIEKAKEIAEKVKG------------------- | |||||||||||||
10 | 6ezvX | 0.06 | 0.06 | 2.52 | 0.84 | PROSPECTOR2 | TTQQTTQSAFLATDDLSKKLDSAKLVAKQWIDDLGPQV------------SASIPSSVINFDATFQASIDAIHELYK-------ADPTASGKD------NTTVQQASQIMTALSSQSGIEATVKGMNKELSDWGVKMNIQKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQVAVGVGIFMLVAATAGTAAAVSGGIAAVGAAGVTWGVLQNQIDDDYDSIAQEQKQKAEDQQQIIALQGLSNASSAVVSAIETSTSVLSDFETTWTVFGNELDDVVTKLNNGASMQAKIAIETKELAPAV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |