Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LEAKSLNPCMENSKFTATLFSVVFTPDNRTVTFNINGISSISGNVTAELEVIAYGYTAVRQSLNPCKMNLEGMCPMNTGQINLPGNIPDISPDVVNQVPGIAYTVPDLDGTVKIYINSTDTNTPLACVEAQMSNGKTV |
1 | 2hkaA | 0.14 | 0.12 | 4.19 | 1.45 | SPARKS-K | | -EPVKFKDCGSWV-GVIKEVNVSPCPRGQSYSVNVTFTSNTQQSSKAVVHGIVMGVPFPIPESDGCKS--GIRCPIEKDK-TYNYVNKPVKNEY-----------PSIKVVVEWELTDDK-NQRFFCWQIPIEVEA-- |
2 | 1pu5A | 0.16 | 0.15 | 5.04 | 1.27 | FFAS-3D | | MSSFSWDNCDEKDPAVIRSLTLEPDPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPHFCDYGLPCHCPFKEGTYSLPKSEFVVPDELPSWLTTGNY---------RIESVLSSSGKRLGCIKIAAS-LKGI |
3 | 2hkaA | 0.16 | 0.14 | 4.58 | 1.43 | HHpred | | -EPVKFKDCGSW-VGVIKEVNVSPCPRGQSYSVNVTFTSNTQQSSKAVVHGIVMGIPVPIPESDGCKS--GIRCPIEKDKYNYVNKL-PVKNE----YPSIKVV-------VEWELTDD-KNQRFFCWQIPIEVEA-- |
4 | 3rg1C | 0.19 | 0.17 | 5.36 | 1.18 | MUSTER | | NLQVLYQSCDPLQDF---GFSVDQCALKPNINIRFGMVLRED-QLFLDVALFSKGLSILNFSYPVCEVDLPKFCGRRKGEIYYAGPIN---------NPGF--EIPEGDYQVLLELYNQD-HATVACANATVLY---- |
5 | 1nepA | 0.18 | 0.15 | 4.96 | 1.63 | CNFpred | | -EPVKFKDCGSW-VGVIKEVNVSPCP-GQSYSVNVTFTSNTQQSSKAVVHGIVMGIPVPFPISDGCKS--GIRCPIEKDTYNYVNKLPV-----KNEYPSIKVV-------VEWELTDD-KNQRFFCWQIPIEVEA-- |
6 | 3rg1C | 0.15 | 0.13 | 4.38 | 2.04 | HHsearch-2 | | NLQVLYQSCDPL---QDFGFSVDQCALKPNINIRFGMVLREDEQLFLDVALFSKGLSILNFSYPVCEVDKFSFCGRRKGEIYYAGPI-NNPFE----IPEGDYQ-------VLLELYNQ-DHATVACANATVLY---- |
7 | 3m7oA | 0.14 | 0.12 | 4.21 | 1.43 | Neff-PPAS | | -LEVVYQSCDPLQDFGLSIDCSKQIQSNLNIRFGIILRQDIR-KLFLDITLMAKGSSILNYSYPLCEEDQPSFCGRRKGEQIYYAGPVNNPGLD----------VPQGEYQLLLELYNEN-RATVACANATVTSS--- |
8 | 3mtxA | 0.17 | 0.15 | 4.98 | 2.88 | HHsearch | | NLEIYYKSCDPQ---QDFAFSIDRCSTTHTFDIRAAMVLRQSKELYAKVDLIINGKTVLSYSETLCGPGKLIFCGKKKGELYYEGPI-TLGKE----IPQRDYT-------ITARLTNE-DRATVACADFTVKNYL-- |
9 | 3mtxA | 0.17 | 0.15 | 4.99 | 0.93 | PROSPECTOR2 | | NLEIYYKSCDPQQDFA---FSIDRCSTTHTFDIRAAMVLRQSKELYAKVDLIINGKTVLSYSETLCGPGLSKLCGKKKGEHLYYEGPITLGI---KEIPQRDYT-------ITARLTN-EDRATVACADFTVKN--YL |
10 | 2e56A | 0.13 | 0.11 | 3.77 | 1.01 | SAM | | -ASISYTYCDKQYPI---SINVNPCIKGSKGLLHIFYIPRRDKQLYFNLYITVNTMNLPKRKEVICRGSDYSFCRALKGEVNTTISF-SFKIK----FSKGKYK-------CVVEAISG-SEEMLFCLEFVI------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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