Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QCPVDILKLGACVDVLGGIVGIIIGGSAKEKCCPLLQGVADLDAALCLCTAIEAKLLNVNIVLPIALKVLIDDCGKNPPSGFTCP |
1 | 1hypA | 0.36 | 0.31 | 9.11 | 2.83 | SPARKS-K | | SCP----DLSICLNILGG------SLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCP |
2 | 1hypA | 0.36 | 0.31 | 9.11 | 1.46 | FFAS-3D | | SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGIL---NLNRNLQLILNSCGRSYPSNATCP |
3 | 1hypA | 0.38 | 0.32 | 9.42 | 2.80 | HHpred | | SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATCP |
4 | 1hypA | 0.38 | 0.32 | 9.42 | 3.15 | MUSTER | | SCP----DLSICLNILGGSLG------TVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCP |
5 | 1hypA | 0.34 | 0.28 | 8.45 | 1.13 | CNFpred | | ------PDLSICLNILGG------SLGTVDDCCALIGGLGDIEAIVCLCIQLRALG---ILNLNRNLQLILNSCGRSYPSNATCP |
6 | 1hypA | 0.38 | 0.32 | 9.42 | 4.04 | HHsearch-2 | | SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATCP |
7 | 1hypA | 0.36 | 0.31 | 9.11 | 4.07 | Neff-PPAS | | SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGIL---NLNRNLQLILNSCGRSYPSNATCP |
8 | 1hypA | 0.37 | 0.31 | 9.09 | 5.02 | HHsearch | | SCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATC- |
9 | 1hyp | 0.36 | 0.31 | 9.11 | 0.91 | PROSPECTOR2 | | SCP----DLSICLNILGG------SLGTVDDCCALIGGLGDIEAIVCLCIQLRAL---GILNLNRNLQLILNSCGRSYPSNATCP |
10 | 1hypA | 0.35 | 0.28 | 8.44 | 0.78 | SAM | | ----SCPDLSICLNILGGS--------TVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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